Gene RSP_1391 details

Gene Information

• Locus tag: RSP_1391
• Symbol: tbpA
• ID: 3720797
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodobacter sphaeroides 2.4.1
• Kingdom: Bacteria
• Replicon accession: NC_007493
• Strand: +
• Start bp: 3168984
• End bp: 3170012
• Gene Length: 1029 bp
• Protein Length: 342 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 640072617
• Product: thiamine transporter substrate binding subunit
• Protein accession: YP_354471
• Protein GI: 77464967
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG4143] ABC-type thiamine transport system, periplasmic component
• TIGRFAM ID: [TIGR01254] ABC transporter periplasmic binding protein, thiB subfamily; [TIGR01276] thiamine ABC transporter, periplasmic binding protein

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.994265
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTCCTC ATCCCGTTCC GTTCCGCGTC GAAGAGGAGG ATGAGATGAG ACTTCCGATC 
GTTGCTTCCT GTGTTGCGCT GGCTGCGGGA ACGGCCGCGG CCGAGACGCC CGTGCTGACG 
GTGCTGACCT ACGACAGCTT CACCTCGGAA TGGGGTCCTG GCCCCGCGGT CGAGAAAGCC 
TTCGAGGAGA CCTGCGCCTG CGACCTGCGC TTCGTCGCCG CGGGCGACGG GGCGGCGCTT 
CTGGCGCGGC TCCAGCTCGA GGGCGCGCGG AGCGAGGCCG ATGTGGTTCT GGGGCTCGAC 
ACGAACCTCA CGGCGGCGGC GGCCGCGACC GGCCTCTTCG CTCCGCACGG CGTGAGCACG 
CCGCTCGATC TGCCGGTGGC CTGGGAGGAT CCGGTGTTCC TGCCCTTCGA CTGGGGCTGG 
TTCGCCTTCG TCCATGACCG CAGGATGGAA GATGTGCCGG CCTCGTTCGA GGAGCTGGCG 
GCGTCGGACT CCAAGATCGT CATCCAGGAT CCGCGCAGCT CGACCCCGGG TCTGGGCCTT 
CTGATGTGGG TGGAGGCGGC CTACGGCGAC CGCGCGCCCG AGATCTGGGA GGGGCTCGCC 
GACAATATCG TGACGGTGAC GCCCGGCTGG TCCGAGGCCT ACGGCCTCTT CATGGAGGGC 
GAGGCCGACA TGGTGCTGAG CTACACCACC TCGCCCGCCT ACCATCTGAT CGCTGAGGAG 
GACGATACCA AGACTGCGGC CGCCTTCCGC GAGGGGCACT ATCTGCAGGT CGAGGTGGCG 
GGCAAGCTGG CCGCGACCGA CCAGCCGGAG CTGGCCGACC GCTTCATGGC CTTCCTGCTG 
GAGGAGCCGG TGCAGTCGGT GCTGCCCACG ACGAACTGGA TGTATCCGGC GAAGCTGCCC 
GCCGCGGGCC TGCCCGAGGG GTTCGAGACG CTGGTGCAGC CCGAGACCTC GCTTCTGCTG 
TCGGCTGACG AGGCGCTCGC CCTCCGGCCC GAGGCTCTGG CCGAATGGCA AGACGCGCTG 
GCGCGCTGA 

 

Protein sequence

MAPHPVPFRV EEEDEMRLPI VASCVALAAG TAAAETPVLT VLTYDSFTSE WGPGPAVEKA 
FEETCACDLR FVAAGDGAAL LARLQLEGAR SEADVVLGLD TNLTAAAAAT GLFAPHGVST 
PLDLPVAWED PVFLPFDWGW FAFVHDRRME DVPASFEELA ASDSKIVIQD PRSSTPGLGL 
LMWVEAAYGD RAPEIWEGLA DNIVTVTPGW SEAYGLFMEG EADMVLSYTT SPAYHLIAEE 
DDTKTAAAFR EGHYLQVEVA GKLAATDQPE LADRFMAFLL EEPVQSVLPT TNWMYPAKLP 
AAGLPEGFET LVQPETSLLL SADEALALRP EALAEWQDAL AR