Gene RSP_1229 details

Gene Information

• Locus tag: RSP_1229
• Symbol: gidA
• ID: 3719677
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodobacter sphaeroides 2.4.1
• Kingdom: Bacteria
• Replicon accession: NC_007493
• Strand: -
• Start bp: 2999790
• End bp: 3001670
• Gene Length: 1881 bp
• Protein Length: 626 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 640072457
• Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
• Protein accession: YP_354311
• Protein GI: 77464807
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division
• TIGRFAM ID: [TIGR00136] glucose-inhibited division protein A

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGGGTGT TTCACGTGAA ACATTTCGAC GTTGTTGTCA TCGGTGGGGG GCACGCCGGC 
TGTGAAGCGG CTGCCGCTGC TGCGCGCATG GGCGTTCAGG TTGCGCTGTT TACCCTCCGC 
AAGTCCGGGC TCGGCGTCAT GTCCTGCAAC CCGGCCATCG GTGGGCTTGG AAAAGGCCAC 
CTCGTGCGCG AGATCGATGC ACTCGACGGC ATCATGGGCC GCGCGGCCGA TGAGGCGGGC 
ATCCAGTTCC GCCTGCTGAA TCGGAAGAAG GGTCCGGCCG TGCAAGGCCC GCGCGCCCAA 
GCGGATCGCC GGCTATATCG TGAAGCCGTG CAGCGGCTTC TGGCAGCGCA GCCCGGTCTG 
ACGGTTATTG AGGGTGAGGT CGTCGACCTG CAGGTCAATG GCGGTCGGGT TCAGGGAGTC 
TCGTTGGCAG ACGGGACGAG TGTCTGGGCA GGGCGGGTGA TCCTCACCTC GGGGACGTTC 
CTGAACGGCA TTATTCATAT CGGCGACCAA CGGCGTCCCG GGGGTCGGAT GGGCGACGAT 
CCATCGCAGC GGCTCGCGGC AGTCTTGGGA GAGCTGTCTC TGGCGCGCGG GCGGCTGAAA 
ACTGGCACCC CGCCGCGCCT CGATGGCCGC ACGATTCGCT GGACCGAGCT TGAGATGCAG 
CCGGGAGACG AGGATCCGGT TGTCTTCTCG TTCCTGAACC GGGCGCCCAA AGCGCGTCAG 
ATTGCCTGCG GGATCACCCA TACGAACGCA CGGACTCACC AGATCGTGCG GGATAACCTG 
AGTCGCTCCG CAATGTATGG GGGCCATATC GAGGGTGTCG GGCCGCGCTA CTGTCCGTCC 
ATCGAGGACA AGATTGTGCG TTTCGCGGAT AAGGAGGCGC ATCAGGTCTT TCTTGAGCCC 
GAAGGCCTCG ATGATGACAC CGTCTATCCC AACGGGATCT CGACCTCTCT TCCAGCGGAG 
GTTCAGGAGG CGTACGTTCG CACGATTGCC GGGCTCGAGG ATGTGCGCAT CCTGCAGCCC 
GGCTACGCGA TTGAGTACGA CTATTTCGAT CCGCGTGAGC TCCGTCCAAC TCTCGAAGTG 
AAGGCACTTG GCGGGCTCTA CTTCGCCGGG CAGATCAACG GCACCACCGG TTACGAAGAG 
GCCGCTGCCC AAGGGCTCGC GGCGGGGCTC AATGCGGCCC TTTCGATCCG GGAGCGCGAG 
CCGCTCCACT TCAGCCGCTC GGGGAGCTAC CTCGGCGTGA TGATCGACGA TCTTACGAGC 
CGTGGCGTCA CCGAACCCTA TCGGATGTTC ACGTCGCGGG CCGAGTTCCG TCTGTCTCTC 
CGCGCCGACA ATGCCGACCA ACGCCTGACG CCCATCGGGC TGGATCTGGG CTGCGTCAGC 
GATGCGCGGC GGGAGAGCTT CAACAGGAAG CGCGAGTTGC TGGAGAAGGG GAGGGCCCTT 
CTCGAGGGCA GCAGCTTCAC TCCGTCGCAG TTGAACGAGC TGGGGATCCA GGTCAGCCAG 
GATGGCATGC GACGCACAGC TTTCGCCGTG ATGGCCTTCG GGGAGGAGGC CGCGAGCGCC 
GTTGCGCGGG GTGTCGAGGG GTACGGCGAT CTTCCGGAAG AGATCCGTCA GCAGCTGGCA 
AAGGACGGGC TCTATGCTCA ATTCATCCTG CGGCAGGAAG AGGAGGCAGC GGCGCTGAAG 
CGCGACGAGG CGATCCGCAT TCCCGCGGAC TTCGATTATG CGCCGCTATC GGGACTTTCG 
AGTGAGCTGA AGTCCAAGCT GATGCGTGCC CGTCCGTCGA CCATCGCTCA GGCCGCACAG 
CTGGAGGGGA TGACCCCGTC CGCCCTGACG TTGATCCTGG CTCGTCTGCG CCGCGCTGGC 
CGGGACGCGG CGGCGGTATG A 

 

Protein sequence

MRVFHVKHFD VVVIGGGHAG CEAAAAAARM GVQVALFTLR KSGLGVMSCN PAIGGLGKGH 
LVREIDALDG IMGRAADEAG IQFRLLNRKK GPAVQGPRAQ ADRRLYREAV QRLLAAQPGL 
TVIEGEVVDL QVNGGRVQGV SLADGTSVWA GRVILTSGTF LNGIIHIGDQ RRPGGRMGDD 
PSQRLAAVLG ELSLARGRLK TGTPPRLDGR TIRWTELEMQ PGDEDPVVFS FLNRAPKARQ 
IACGITHTNA RTHQIVRDNL SRSAMYGGHI EGVGPRYCPS IEDKIVRFAD KEAHQVFLEP 
EGLDDDTVYP NGISTSLPAE VQEAYVRTIA GLEDVRILQP GYAIEYDYFD PRELRPTLEV 
KALGGLYFAG QINGTTGYEE AAAQGLAAGL NAALSIRERE PLHFSRSGSY LGVMIDDLTS 
RGVTEPYRMF TSRAEFRLSL RADNADQRLT PIGLDLGCVS DARRESFNRK RELLEKGRAL 
LEGSSFTPSQ LNELGIQVSQ DGMRRTAFAV MAFGEEAASA VARGVEGYGD LPEEIRQQLA 
KDGLYAQFIL RQEEEAAALK RDEAIRIPAD FDYAPLSGLS SELKSKLMRA RPSTIAQAAQ 
LEGMTPSALT LILARLRRAG RDAAAV