| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_1108 |
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| Symbol | truB |
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| ID | 3720692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | + |
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| Start bp | 2865122 |
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| End bp | 2866027 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640072339 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_354194 |
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| Protein GI | 77464690 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.610694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGACGGA CGCGCAAGGG CCGGGCGATC TCGGGCTGGC TGGTGGTGGA CAAGCCTGCG
GGCATGACCT CGACCGCGGT CGTGAACAAG GTGCGCTGGG CGCTCGAGGC GCAGAAGGCG
GGCCATGCGG GCACGCTCGA CCCCGATGCG ACGGGCGTTC TGGCCGTAGC CCTGGGCGAG
GCCACGAAGA CCGTGCCCTA CATCACCGAT GCGCTGAAAT GCTACCGCTT CATGGTGCGG
CTGGGCCTGT CCACCCGCAC CGACGACGCG AGCGGCGAGG TGATCGCCAC CTCCGAGGCG
CGCCCGACGG ATGCGGAGAT CGAGGCAGCG CTGGCGGCCT TCCGGGGCGA GATCCAGCAG
GTGCCGCCGC AGTTCTCGGC GGTGAAGGTC GAGGGCGAGC GCGCCTATGA TCTCGCCCGG
GACGGCGAGC GGCTGGATCT GGCGGCCCGT CCGCTCTGGG TCGAAAGCCT CGAAATCCTT
TCGCGGCCCG ACGCGGACCA TGTCGAGCTG GAGATGGTCT GCGGCAAGGG CGGCTATGTC
CGCTCCATCG CGCGCGATCT CGGCGAGGCG CTCGGCTGCC ACGGCCATGT CGCCTGGCTG
CGCCGCACCT GGTCGGGGCC GTTCGAGGCC GAGGACGGGA TCTCGGTCGC GACCATCGAC
GAGCTCGCGC GGAGCGAGGC GCTGCTTTCC CATGTGCTGC CGCTGGCGAA GGGCCTCGCG
GATCTGCCCG AACTGCCGGC CACGCCCGAG GGGGCCGCGC GGCTCCGGTG CGGCAATCCC
GGCATGGTCA TCGCCTCGGA TGTCGAGTTC GGCGAGGAAG CCTGGGCGAG TTTCCAGGGC
CAGCCCGTCG CGGTGGGCAT CTACAAGTCG GGCGAGCTGC ATCCGAGCCG GGTGTTCAAC
CTCTGA
|
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| Protein sequence | MGRTRKGRAI SGWLVVDKPA GMTSTAVVNK VRWALEAQKA GHAGTLDPDA TGVLAVALGE
ATKTVPYITD ALKCYRFMVR LGLSTRTDDA SGEVIATSEA RPTDAEIEAA LAAFRGEIQQ
VPPQFSAVKV EGERAYDLAR DGERLDLAAR PLWVESLEIL SRPDADHVEL EMVCGKGGYV
RSIARDLGEA LGCHGHVAWL RRTWSGPFEA EDGISVATID ELARSEALLS HVLPLAKGLA
DLPELPATPE GAARLRCGNP GMVIASDVEF GEEAWASFQG QPVAVGIYKS GELHPSRVFN
L
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