Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_1087 |
Symbol | |
ID | 3720846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | - |
Start bp | 2844837 |
End bp | 2845574 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640072319 |
Product | short-chain dehydrogenase/reductase family protein |
Protein accession | YP_354174 |
Protein GI | 77464670 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.3765 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGACT TTGTAGGTAA GCGGTATTGG CTCATCGGCG GCAGCGAGGG CCTCGGTCTC GCGCTGGCGA AGAAACTGAG CGGCGCGGGG GCGAAGGTGA TCCTGTCGGG TCGCGACGAG GCCCGGCTGG CAGAGGCCGT GGCGGCCATG CCGGCGCCCG CCGAGGCGGT CACCCTCGAC GTGACCTCCG AGGCCTCGAT CGAGGCGGCG CTCGCGCAGG TCGGCGCCTT CGACGGGGTG GTCTACCTCG CCGGCGCCTA CTGGCCGATG AAGGCGCAGG CCTGGGAGGC GAGCCGGGTC GAGGCGATGA TCGACACGAA CCTTCTGGGG CTCGTGCGGC TTCTGTCGGC GGTGCTTCCG GGCATGATCG CTGCGAACCG CGGCCATCTG GTGGTGACGG GCAGCATCGG CGGCTATCGC GGCCTGCCGG GCGCCATCGG CTATTCGGCC AGCAAGGCAG GCGTGATGGC CCTGACCGAG TCGCTCTATG CCGATCTGCG CGACACGGGC GTCGAGGTGC AGCTCGTGAA CCCGGGCTTC ATCCGCACGC GGCTGACCGA GAAGAACCGG TTCCGCATGC CCTTCATCAT GGAGCCCGAG GCGGCCGCGC AGCGGATGTT CGAACATATG TGCGCGGACA ATTTCCGTGC CAACTTCCCG GTGCTCTTCG CCTCGTTCTT CCGCTTCTCG CAGCTCCTGC CGGACGGGCT GTTCTACCGG CTGCTCGGCA AGGGCTGA
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Protein sequence | MRDFVGKRYW LIGGSEGLGL ALAKKLSGAG AKVILSGRDE ARLAEAVAAM PAPAEAVTLD VTSEASIEAA LAQVGAFDGV VYLAGAYWPM KAQAWEASRV EAMIDTNLLG LVRLLSAVLP GMIAANRGHL VVTGSIGGYR GLPGAIGYSA SKAGVMALTE SLYADLRDTG VEVQLVNPGF IRTRLTEKNR FRMPFIMEPE AAAQRMFEHM CADNFRANFP VLFASFFRFS QLLPDGLFYR LLGKG
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