Gene RSP_1087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_1087 
Symbol 
ID3720846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007493 
Strand
Start bp2844837 
End bp2845574 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content68% 
IMG OID640072319 
Productshort-chain dehydrogenase/reductase family protein 
Protein accessionYP_354174 
Protein GI77464670 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.3765 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGACT TTGTAGGTAA GCGGTATTGG CTCATCGGCG GCAGCGAGGG CCTCGGTCTC 
GCGCTGGCGA AGAAACTGAG CGGCGCGGGG GCGAAGGTGA TCCTGTCGGG TCGCGACGAG
GCCCGGCTGG CAGAGGCCGT GGCGGCCATG CCGGCGCCCG CCGAGGCGGT CACCCTCGAC
GTGACCTCCG AGGCCTCGAT CGAGGCGGCG CTCGCGCAGG TCGGCGCCTT CGACGGGGTG
GTCTACCTCG CCGGCGCCTA CTGGCCGATG AAGGCGCAGG CCTGGGAGGC GAGCCGGGTC
GAGGCGATGA TCGACACGAA CCTTCTGGGG CTCGTGCGGC TTCTGTCGGC GGTGCTTCCG
GGCATGATCG CTGCGAACCG CGGCCATCTG GTGGTGACGG GCAGCATCGG CGGCTATCGC
GGCCTGCCGG GCGCCATCGG CTATTCGGCC AGCAAGGCAG GCGTGATGGC CCTGACCGAG
TCGCTCTATG CCGATCTGCG CGACACGGGC GTCGAGGTGC AGCTCGTGAA CCCGGGCTTC
ATCCGCACGC GGCTGACCGA GAAGAACCGG TTCCGCATGC CCTTCATCAT GGAGCCCGAG
GCGGCCGCGC AGCGGATGTT CGAACATATG TGCGCGGACA ATTTCCGTGC CAACTTCCCG
GTGCTCTTCG CCTCGTTCTT CCGCTTCTCG CAGCTCCTGC CGGACGGGCT GTTCTACCGG
CTGCTCGGCA AGGGCTGA
 
Protein sequence
MRDFVGKRYW LIGGSEGLGL ALAKKLSGAG AKVILSGRDE ARLAEAVAAM PAPAEAVTLD 
VTSEASIEAA LAQVGAFDGV VYLAGAYWPM KAQAWEASRV EAMIDTNLLG LVRLLSAVLP
GMIAANRGHL VVTGSIGGYR GLPGAIGYSA SKAGVMALTE SLYADLRDTG VEVQLVNPGF
IRTRLTEKNR FRMPFIMEPE AAAQRMFEHM CADNFRANFP VLFASFFRFS QLLPDGLFYR
LLGKG