| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_1076 |
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| Symbol | sohB |
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| ID | 3720891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | - |
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| Start bp | 2832130 |
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| End bp | 2832927 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640072306 |
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| Product | S49 family peptidase |
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| Protein accession | YP_354161 |
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| Protein GI | 77464657 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAGT ATATCCCGTT CATCAGGAAG GACCCGGTTG TCCCGGTGAT CCGGCTTCAG
GGTGTGATCG CCTCCGGGCC GCGCGGCGGC CTGTCGGATC AGGGCCTCGC GGCCGTGATC
GAGAAGGCCT TCCGGCGCGG GAAACCGGCC GGCGTCGCGC TCGTCATCAA CTCGCCCGGC
GGCTCGCCGG TGCAGTCGAG CCTGATCGCC GCCCGCATCC GCCGCCTCGC CTCCGAAAAG
GGCGTGCGCG TCCATGCCTT CGTCGAGGAT GTGGCGGCCT CGGGCGGCTA CTGGCTCGCC
TGCGCGGGCG ACGAGATCTG GGTGGACGAG AGCTCGCTCG TGGGCTCGAT CGGGGTCATC
TTCTCGAGCT TCGGCTTCCA CGAATTCATG GCCCGCAACG GCATCGAGCG GCGCGTCCAT
ACCGCCGGGC GCTCGAAATC GCTGGCCGAC CCGTTCCTGC CCGAGAAGCC CGAGGATGTG
GAGCGGCTGA AGGCCCTGCA GGAGCCGATC CATCGCGCCT TCATCGAGTA TGTGAAGCGC
CACCGCGGCA CGCGCCTCGA CCTGAACGCC GATCTCTTCA ACGCCGACGT CTGGACCGGG
CAGGAAGCGG TGCGTCTGGG CCTCGCCGAC GGCGTGGCCC ATCTGGTGCC CAAGCTGCAG
GAGAACTACG GCGACAAGGT GCGGCTCGTG CCTTACGGCC AGCGCCGGCC GTTCTTGCAG
CGGCTGGGCA TGAGTCTCGC GGGGCAGGCG CTGGCCGAGG TCGAGAACAG GGCCCTCTGG
GCGCGCTACG GTCTCTGA
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| Protein sequence | MKQYIPFIRK DPVVPVIRLQ GVIASGPRGG LSDQGLAAVI EKAFRRGKPA GVALVINSPG
GSPVQSSLIA ARIRRLASEK GVRVHAFVED VAASGGYWLA CAGDEIWVDE SSLVGSIGVI
FSSFGFHEFM ARNGIERRVH TAGRSKSLAD PFLPEKPEDV ERLKALQEPI HRAFIEYVKR
HRGTRLDLNA DLFNADVWTG QEAVRLGLAD GVAHLVPKLQ ENYGDKVRLV PYGQRRPFLQ
RLGMSLAGQA LAEVENRALW ARYGL
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