| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_0964 |
|---|
| Symbol | sucB |
|---|
| ID | 3720755 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | - |
|---|
| Start bp | 2723312 |
|---|
| End bp | 2724844 |
|---|
| Gene Length | 1533 bp |
|---|
| Protein Length | 510 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640072191 |
|---|
| Product | dihydrolipoamide acetyltransferase |
|---|
| Protein accession | YP_354048 |
|---|
| Protein GI | 77464544 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component)
[TIGR01349] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0477505 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGGGAA CGGAAGTAAG GGTTCCGACG CTGGGAGAGA GCGTCTCCGA GGCGACGGTC
GCCACCTGGT TCAAGAAGCC GGGCGACCGG GTCGCGGCCG ACGAGATGCT CTGCGAGCTC
GAGACCGACA AGGTGACCGT CGAGGTTCAC GCGCCGGTCG CGGGCCGGCT GGTCGAGATC
GTCGCCCCCG AGGGGACGAC GGTTGCGGTC TCGGCGCTTC TGGCGCAGAT CGGAGCAGCG
GAGGCCGGCG AAGACCCGGC TCCGGAGAAG ACTCATGCGG GCGCCGAGGC GAAGGCCGGC
GCGGGAGAGA GCAAGATGAT CGACGTGATG GTGCCTGCCC TTGGGGAATC GGTGTCCGAG
GCGACCGTGT CCACCTGGTT CAAGAAGCCG GGCGATACCG TGGCGCAGGA CGAGATGCTC
TGCGAGCTCG AGACCGACAA GGTCTCGGTC GAGGTGCCGG CGCCCGCCGC GGGCGTGCTG
GCCGAGATCC TCGTGACCGA GGGCACGACG GTCGCCGCGG GCTCGAAGCT CGCGCTGATC
TCGTCCGACG GGCAGGGCGT GGCCGCCGCG CCGAAGGCCG AGACGCCGAA GAAGACCGAG
GCCGCCCCCG CGCAGGAGCC CGCGCCGAAG AAGGATGTCG AGGATGCACC CTCGGCCAGG
AAGGCGATGG CCGAGGCCGG CCTCTCGCCC GACGCGGTGC AGGGCACCGG GCGCGATGGC
CGCATCATGA AGGACGACGT AGCCCGCGCC GTCTCGGGCG CCTCGCAGGC CGCGGCCCCC
ACGCCCGCCC CGCAGCCCGC GCTGCCGCGC CAGCCGGTCC CGGCCGACGA TGCGGCGCGT
GAGGAGCGGG TCAAGATGAC CCGTCTGCGC CAGACCATCG CCCGCCGCCT GAAGGAGGCG
CAGAACACCG CCGCCATGCT CACCACCTAC AACGAGGTGG ACATGTCGGG CGTCATGGGC
CTGCGCAACG AATACAAGGA CGCGTTCGAG AAGAAGCACG GCACCAAGAT GGGCTTCATG
TCCTTCTTCG TGAAAGCCTG CTGCCATGCG CTGAAGGAAG TGCCCGAGGT CAATGCCGAG
ATCGACGGCA CCGACATCGT CTACAAGAAC TACGTCCACA TGGGCGTGGC GGTGGGCACC
CCCTCGGGCC TCGTGGTGCC GGTGGTGCGC GACGCCGACC AGATGGGCTT CGCCCAGATC
GAGAAGAAGA TCGCCGAACT CGGGCTGCGT GCCCGTGACG GCAAGCTCTC GATGGCCGAG
ATGCAGGGCG GCAGCTTCAC CATCTCGAAC GGCGGCGTCT ATGGCTCGCT CATGTCCTCG
CCGATCCTGA ACCCGCCGCA GTCGGGCATC CTCGGCATGC ACAAGATCCA GGAGCGGCCG
GTGGTCGAGA AGGGCCAGAT CGTCATCCGC CCGATGATGT ATCTCGCGCT CAGCTACGAT
CACCGCATCG TCGATGGCAA GGGCGCGGTG ACCTTCCTCG TCCGCGTCAA GGAGGCGCTC
GAGGATCCGC GCCGCCTGCT GCTCGACCTC TGA
|
|---|
| Protein sequence | MMGTEVRVPT LGESVSEATV ATWFKKPGDR VAADEMLCEL ETDKVTVEVH APVAGRLVEI
VAPEGTTVAV SALLAQIGAA EAGEDPAPEK THAGAEAKAG AGESKMIDVM VPALGESVSE
ATVSTWFKKP GDTVAQDEML CELETDKVSV EVPAPAAGVL AEILVTEGTT VAAGSKLALI
SSDGQGVAAA PKAETPKKTE AAPAQEPAPK KDVEDAPSAR KAMAEAGLSP DAVQGTGRDG
RIMKDDVARA VSGASQAAAP TPAPQPALPR QPVPADDAAR EERVKMTRLR QTIARRLKEA
QNTAAMLTTY NEVDMSGVMG LRNEYKDAFE KKHGTKMGFM SFFVKACCHA LKEVPEVNAE
IDGTDIVYKN YVHMGVAVGT PSGLVVPVVR DADQMGFAQI EKKIAELGLR ARDGKLSMAE
MQGGSFTISN GGVYGSLMSS PILNPPQSGI LGMHKIQERP VVEKGQIVIR PMMYLALSYD
HRIVDGKGAV TFLVRVKEAL EDPRRLLLDL
|
|---|
| |