| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_0936 |
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| Symbol | dapF |
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| ID | 3717923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | - |
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| Start bp | 2686494 |
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| End bp | 2687324 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640072161 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_354019 |
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| Protein GI | 77464515 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGCTT CCTCGGGCCT CGGCTTCATG AAGATGCATG GGGCGGGCAA TGATTTCGTG
GTGATCGACT CGCGCGGACG CGGCGGGGCG CTGGTGACGG CCGGCCTCGC GCGGGCGCTG
GGCGACCGAC ACCGCGGCGT GGGCTTCGAC CAGCTGGCCG AGATCCGCGA TCAGGAGGGG
GCGGATTGCG CGCTCGACTT CTGGAACTCG GACGGCTCGC GCTCGGGCAC CTGCGGCAAT
GCCACGCGCT GCGTCAGCGA CTACCTGATG CGGGATCTGG GCCGGGACGA GGTGAATCTC
GTCACCGCGC GCGGCCGCCT GCACGCGCGG CGGCGCGAGG ACGGGCTCGT CGCGGTGAAC
ATGGGCGCGC CGCAGCTCCT GTGGTCCGAG ATCCCGCTCG CCCGCGCGAT GGAGACCGAC
AGCCTGCCGC TCGAGGGCAC GCCCTCGGCG GTGGGCATGG GCAATCCGCA TTGCATCTAC
TTCGTCGAGG ATGCCGAGGC GGTCGATCTG GCAGGGCGGG GGGCGGCGGT CGAGACCGAT
CCGCTGTTTC CCGAGCGCAC CAATGTGGAG TTCGCGAGCC TGATCGGCCC GGACCGGCTG
CGGCTGCGCG TCTGGGAGCG CGGGGCGGGC ATCACGCTCG CCTGCGGCTC GGGCGCCTGC
GCCACGGCGG TGGCGGCGGC CCGGCGCGGC CTGACGGGGC GGCAGGTGCG GCTCGAGATG
GACGGGGGCG TGCTGGAAGT GGACTGGCGC GACGAGGGCG TCTGGCTCTC GGGGCCGGTC
GCGCGGGTGT TCGAGGGGCA CCTCTCACCC GAGATGATGG CGCTGGCATG A
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| Protein sequence | MGASSGLGFM KMHGAGNDFV VIDSRGRGGA LVTAGLARAL GDRHRGVGFD QLAEIRDQEG
ADCALDFWNS DGSRSGTCGN ATRCVSDYLM RDLGRDEVNL VTARGRLHAR RREDGLVAVN
MGAPQLLWSE IPLARAMETD SLPLEGTPSA VGMGNPHCIY FVEDAEAVDL AGRGAAVETD
PLFPERTNVE FASLIGPDRL RLRVWERGAG ITLACGSGAC ATAVAAARRG LTGRQVRLEM
DGGVLEVDWR DEGVWLSGPV ARVFEGHLSP EMMALA
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