Gene RSP_0921 details

Gene Information

• Locus tag: RSP_0921
• Symbol: exbD
• ID: 3717908
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodobacter sphaeroides 2.4.1
• Kingdom: Bacteria
• Replicon accession: NC_007493
• Strand: +
• Start bp: 2671077
• End bp: 2671502
• Gene Length: 426 bp
• Protein Length: 141 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 640072146
• Product: biopolymer transport protein, ExbD
• Protein accession: YP_354004
• Protein GI: 77464500
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0848] Biopolymer transport protein
• TIGRFAM ID: [TIGR02803] TonB system transport protein ExbD, group 1

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.284427
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGGGGT TCCGCGGCAG CGACGGCGAC GATCTGAACC ACGAGATCAA CGTCACGCCC 
TTCATCGACG TGATCCTCGT GCTGCTCATC ATCTTCATGG TGGCGGCGCC CCTCTCGACG 
GTGGATGTGC CGGTCGATCT GCCGGGCTCG ACCGCGAGCC AGAGCCAGCG GCCGGAAGAG 
CCGATTTTCC TCACGCTGCA GAAGGATCTG ACGCTGTCGC TGAAGAACAC GGCCATCGCG 
CGCGCGGCGC TGCAGGCGGA TCTCGACGCG GCGACGCAGG GCAATCGCGA CACGCGGATC 
TTCCTGCGCG CGGATGAGGC GGTGCCCTAC GGCGACCTGA TGGAGGTGAT GAACCTGCTG 
CGCGGCGCGG GCTACCTGAA GGTGGCGCTG GTCGGGCTGG AGGCGCTTCC GGGAGGCACG 
CCATGA 

 

Protein sequence

MAGFRGSDGD DLNHEINVTP FIDVILVLLI IFMVAAPLST VDVPVDLPGS TASQSQRPEE 
PIFLTLQKDL TLSLKNTAIA RAALQADLDA ATQGNRDTRI FLRADEAVPY GDLMEVMNLL 
RGAGYLKVAL VGLEALPGGT P