Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_0904 |
Symbol | sitA |
ID | 3717967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | + |
Start bp | 2653510 |
End bp | 2654403 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640072129 |
Product | ABC Mn+2/Fe+2 transporter, periplasmic substrate-binding protein SitA |
Protein accession | YP_353987 |
Protein GI | 77464483 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.785043 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATGC GACGGATCGG ATGGGCCGCC TCGATGGCGA CGCTCCTCAT GGCAGGGCCG GCGCTCGCCG ACCGGCTGAA GGTCGCCACG ACCTTCACGG TCATCGCCGA CATGGCGCAG AACGTGGCGG GCGACGCGGC CGAGGTGGTG TCGATCACCC GCCCCGGCGC CGAGATCCAC GGCTACGAGC CCACGCCGCG CGATATCGTG CGCGCCTGGG ACGCGGACCT GATCCTCTGG AACGGGCTCA ATCTCGAGCT CTGGTTCGAG CAGTTCCTCT CCAACCTGAA GGATGTGCCG TCGGTGACGG TGAGCGACGG GATCGAGCCG CTGGCGGTCG CGGGCGGCGA ATATCGCGGC AGGCCCAATC CGCACGCCTG GATGGGCCTC GACAATGCCA TGATCTACAT CGACAACATC GCCCGCGCGC TGGCCGAGGC CGATCCGGCC CATGCCGAGA CCTATCGGGC CAATGCGGCA GGCTACAAGG AGCGGCTCCG GGCGACCATC GGGCCCCTGC GCGACCGGAT CGCGGCCCTG CCCGAGGAGC GGCGCTGGCT CGTGACCTGC GAGGGCGCCT TTTCCTATCT CGCCCGCGAC TTCGGGCTGA AGGAGCTCTA TCTCTGGCCG ATGAACACCG ATCAGGTCGG CACGCCGCAG CAGGTGCGCA CGGTGATCGA CGGGGTGAAG GCCCACGCGA TCCCGGCGGT CTTCTGCGAG AGCACGGTGA ACAACGCCCC CGCCCGGCAG GTCGCGCGCG AGACGGGGGC GGCCTACGGC GGCATGCTCT ATGTGGACAG CCTGAGCCCG CGCGACGGGC CGGTGCCGAC CTATCTCGAC CTCCTGCGGG TGACGGCCGA GACCATCGCG AACGGGCTGG AGGGCACGAG ATGA
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Protein sequence | MNMRRIGWAA SMATLLMAGP ALADRLKVAT TFTVIADMAQ NVAGDAAEVV SITRPGAEIH GYEPTPRDIV RAWDADLILW NGLNLELWFE QFLSNLKDVP SVTVSDGIEP LAVAGGEYRG RPNPHAWMGL DNAMIYIDNI ARALAEADPA HAETYRANAA GYKERLRATI GPLRDRIAAL PEERRWLVTC EGAFSYLARD FGLKELYLWP MNTDQVGTPQ QVRTVIDGVK AHAIPAVFCE STVNNAPARQ VARETGAAYG GMLYVDSLSP RDGPVPTYLD LLRVTAETIA NGLEGTR
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