| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_0796 |
|---|
| Symbol | cobQ |
|---|
| ID | 3718413 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | + |
|---|
| Start bp | 2539186 |
|---|
| End bp | 2540631 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640072016 |
|---|
| Product | cobyric acid synthase |
|---|
| Protein accession | YP_353875 |
|---|
| Protein GI | 77464371 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1492] Cobyric acid synthase |
|---|
| TIGRFAM ID | [TIGR00313] cobyric acid synthase CobQ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCCG TGATGATCCA GGGAACGGGC TCGGACGTGG GCAAGTCGCT GCTGGTGGCC
GGGCTCTGCC GGGCCGCGCG GCGCCGGGGC CTGTCGGTCG CGCCCTTCAA GCCGCAGAAC
ATGTCGAACA ACGCGGCCGT CACCGCCGAC GGCGGCGAGA TCGGGCGGGC GCAGGCCCTG
CAGGCGCGCG CCTCCGGGCT CGAGCCGCTG ACCGACATGA ATCCGGTGCT GCTGAAGCCC
GAGAGCGATC ACGGCTCGCA GGTGATCGTG CAGGGCCGCC GCGTCGGCAC GCTGCGCGCC
CGCGACTGGT TCGAGCGCAA GCCCGCGCTG ATGGCGCCCG TGCTCGAGAG CTTCGCGCGG
CTGACGGCGG CGCACGATCT GGTGATCGTC GAGGGGGCGG GCAGCCCGGC CGAGGTGAAC
CTGCGCCGGG GCGACATCGC CAACATGGGC TTCGCGCGCA CGGCCGGGGT GCCCGTGGTG
CTCGCGGGCG ACATCGACCG CGGCGGCGTG ATCGCCCAGC TTGTCGGCAC GCAGGCGGTG
ATCGATCCCG AGGATGCCGC CATGATCGCG GGCTTCCTCG TGAACAAGTT CCGCGGCGAC
GTGCGGCTCT TCGATGAGGG CTACCGGCTG ATCGAGGCCC GCACCGGCTG GCGCGGCTAT
GGCGTGGTGC CCTTCTTCCC CGAGGCGGCT CTCCTGCCTG CCGAGGATGC GCTGGATCTG
GGGCGCCCCA CCGGGCAGGG CGCGCTGACG GTCGCATGGC TCGCCTTCTC GCGCGTGGCC
AATTTCGACG ATCTCGACCC GCTGAAGCAG GAGCCGGGGC TGACCGTGCG GATGGTGCGC
CCGGGCCAGC CCATCCCGGC CGAGGCCGAT CTCGTGATCC TGCCGGGCAC GAAATCGACG
CGGGGCGATC TGGCCTTCCT GCGGGCGCAG GGGTGGGACG TGGATCTGCG CGCGCACCAT
CGCCGCGGCG GGCGGGTGCT GGGGATCTGC GGCGGCTACC AGATGCTCGG GCGGAGCGTG
GCCGACCCCG AGGGTCTGGA GGGCGCGCCG GGCGTGACCG AGGGGCTGGG GCTTCTCGAC
GTCGAGACGG TGATGCATCC CGACAAGCGG CTCACCCGCG TGGCGGGGCG GCACCGGGCC
AGCGGGGCCG AGCTCACCGG CTACGAGATC CATATCGGCG CGACCGAGGG CCCCGACTGC
GCCCGCCCCT TCGCCGAGAT CGAGGGCCGC CCGGAAGGGG CCACCTCGGC CGACGGACGG
GTGGTCGGCA GCTACCTCCA TGGCATGTTC GGCGCCGATG GCTTCCGGCG CGCCTTCCTC
GAGAGCCTCG GGGCCGCGAC CTCGGATCTC GCCTACGATG CGCGGGTCGA GACGGTGCTC
GACGCGCTCG CGGACCATCT CGAGACCCAT GTCGATGTGG CGGGGCTGCT GGCGCTCGCC
CGCTGA
|
|---|
| Protein sequence | MPAVMIQGTG SDVGKSLLVA GLCRAARRRG LSVAPFKPQN MSNNAAVTAD GGEIGRAQAL
QARASGLEPL TDMNPVLLKP ESDHGSQVIV QGRRVGTLRA RDWFERKPAL MAPVLESFAR
LTAAHDLVIV EGAGSPAEVN LRRGDIANMG FARTAGVPVV LAGDIDRGGV IAQLVGTQAV
IDPEDAAMIA GFLVNKFRGD VRLFDEGYRL IEARTGWRGY GVVPFFPEAA LLPAEDALDL
GRPTGQGALT VAWLAFSRVA NFDDLDPLKQ EPGLTVRMVR PGQPIPAEAD LVILPGTKST
RGDLAFLRAQ GWDVDLRAHH RRGGRVLGIC GGYQMLGRSV ADPEGLEGAP GVTEGLGLLD
VETVMHPDKR LTRVAGRHRA SGAELTGYEI HIGATEGPDC ARPFAEIEGR PEGATSADGR
VVGSYLHGMF GADGFRRAFL ESLGAATSDL AYDARVETVL DALADHLETH VDVAGLLALA
R
|
|---|
| |