Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_0229 |
Symbol | |
ID | 3719407 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | + |
Start bp | 1945888 |
End bp | 1947486 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640071435 |
Product | multidrug efflux pump, MF superfamily |
Protein accession | YP_353300 |
Protein GI | 77463796 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCCAGTC CTGAGGCGCG CGCCACGGGC CTGCGCACCT GGGCGGCCTT CACCGCCATG TGCCTCGGCA TGTTCATGGC GATCCTCGAC GTCCAGATCG TCGCCACCTC GCTGCCCGAG ATGCAGCGCG CGCTCGGGAT CTCTCCCGAC CGGATGAGCT GGGTGCAGAC CGCCTATCTC ATCGCCGAGG TAATCGCGAT CCCGCTCACG GGGGCGCTCA TGCGCATCCT GACCATGCGC GGGCTGTTCG CGCTGACGAC CTCGCTCTTC ACCCTCGCCT CCATCGGCTG CGCGGCCAGC GAGAGCTTCG GGCCGCTGGT GGCCTGGCGG GTGCTGCAGG GCTTTGCCGG CGGCACGCTG ATCCCCGCAG TCTTCGCGGC GGTGTTCCTG CTGTTTCCCG TCCACCGGCA GGGTCTCGCC ACCACGCTTG CGGGCGTGCT CGCCGTGCTT GCGCCCACCG TCGGGCCGGT CGTCGGCGGC TGGATCACCG AAAGCTGGTC GTGGCACTGG CTCTTTCTCA TCAACGTGGC GCCGGGCGTG CTGGCGGTGG GGATCGGCGC GACCCTCCTG CCGCGCGAGC GGCTGCGGCT CGCCGAGGCG CGGCAGCTCG ATCTCGCAGC CCTCGGACTC CTTGCCCTGT CTCTCGCCGC GCTCGAGATC GCGCTGAAGG AGGCGCCGGG GCGCGGCTGG ACGAGCGGCC TTGTCCTCGC TCTTCTCGCC CTCTGGGCCG CCGCGGGCGC GGGCTTCGTG CGCCGCTGCC TGAGCGGCCC CCGCCCCGTG GTGGAGTTGC GCGCCTTCGC CGACCGGCGC TTCGCGCTCG CCTGCGTGCT GAGCTTCGTG CTCGGGATCG GTCTCTTCGG GTCGGTCTAT CTGATGCCGG TCTTTCTCTC CTTCGTGCGC GGACACGGGC CGCTCGAGAT CGGAACGATC ATGCTGGTGA CGGGCGTGGC GCAACTCCTG ACCGCGCCGC TCGCGGTGGC GGCCGAGCAG CGGCTGGGGG CGCGATTGCT GACGGGTTTC GGCTTCGCGC TCTTCGCGGC GGGCCTTGCG CTCAGCTCCT TCCAGACGCC GCGCACCGAT CATGACGAGA TGTTCTGGCC GCAGGTGGTG CGCGGGGTGG CGATCATGTT CTGCCTGCTG CCGCCGACCC GACTCGCGCT CGGCCATCTC TCCGAGGCGC GCGTGGCGGA TGCGAGCGGG CTCTTCAACC TGATGCGCAA CCTCGGCGGC GCCATCGGCC TCGCGCTGAT CGACACGGTG ATCTTCTCGC GCAGCGCGGG CCATGGCGAG AGCCTTCTTA CACGGCTCAC CGCCCGCGAT CTCGAGGCCG CGCGCTTCGT GGGCGTGCCC GAGGCGATGC TCGCGAGCCT GCCGCCGGGG CCGGTGCCGC CTCAGGCGCA GGCGATGCTG GCGCCGCTTC TGGAGAAGGC GGCCCTCACC CAGGCCATCA ATGAAGCCTG GGGGATGATC GCGCTCCTGA CGCTGGCGGC GCTTCTCTGC GTGCCCTTCG CCCGGCCGTC GCGCGGGCAG GATCGGGCCG CCCCGGTCAC GCCGCCGAGA GCGTCGCCAC GACGCTCTCC CACCCCGCGC CGCCGGTGA
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Protein sequence | MPSPEARATG LRTWAAFTAM CLGMFMAILD VQIVATSLPE MQRALGISPD RMSWVQTAYL IAEVIAIPLT GALMRILTMR GLFALTTSLF TLASIGCAAS ESFGPLVAWR VLQGFAGGTL IPAVFAAVFL LFPVHRQGLA TTLAGVLAVL APTVGPVVGG WITESWSWHW LFLINVAPGV LAVGIGATLL PRERLRLAEA RQLDLAALGL LALSLAALEI ALKEAPGRGW TSGLVLALLA LWAAAGAGFV RRCLSGPRPV VELRAFADRR FALACVLSFV LGIGLFGSVY LMPVFLSFVR GHGPLEIGTI MLVTGVAQLL TAPLAVAAEQ RLGARLLTGF GFALFAAGLA LSSFQTPRTD HDEMFWPQVV RGVAIMFCLL PPTRLALGHL SEARVADASG LFNLMRNLGG AIGLALIDTV IFSRSAGHGE SLLTRLTARD LEAARFVGVP EAMLASLPPG PVPPQAQAML APLLEKAALT QAINEAWGMI ALLTLAALLC VPFARPSRGQ DRAAPVTPPR ASPRRSPTPR RR
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