Gene RSP_0024 details

Gene Information

• Locus tag: RSP_0024
• Symbol: rfbC
• ID: 3720159
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodobacter sphaeroides 2.4.1
• Kingdom: Bacteria
• Replicon accession: NC_007493
• Strand: +
• Start bp: 1724906
• End bp: 1725439
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 640071220
• Product: dTDP-4-dehydrorhamnose 3,5-epimerase
• Protein accession: YP_353093
• Protein GI: 77463589
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes
• TIGRFAM ID: [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.141022
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGATTCA TTCCCACGAC GCTCAAGGAT GCCGTCCTGA TCGAGGCTGA GCCGAGAGAA 
GACCACCGGG GCTGGTTCGA GCGCACCTTC TGCATGGAGG AGATGGCCGG TGCCGGCCTG 
AAGACGGGCT TCGTGCAGCA CAACAGCTCT TACAACCATG CCGCAGGAAC GCTGCGCGGG 
ATGCACTACC AGCGCGCGCC CCATTCGGAG GTGAAGGTCA TCACCTGCAC CCGCGGCCGC 
ATCCAGGACG TCATCATCGA CCTGCGCCCG GACTCGCCGA CCTACCTGAA ATGGGAGGGG 
TTCGATCTGA AGGCCGGCGA TCACCGGCAG CTCTATATCC CCGAAGGCTT CGCCCACGGC 
TATCTGACGC TCGAAGATGC GACGGCCGTG TCCTACCTCG TCTCGGCGGC CTACACGCCC 
GGCGCGGAGG GCGGCGTGCG TTGGGATGAT CCCGCCTTCG GGATCGACTG GGCCGCCGAA 
GTGTCGGTGA TCTCGGAAAA GGATGCGGCC TGGCCCGACT TCCAGCCGGC CTGA 

 

Protein sequence

MRFIPTTLKD AVLIEAEPRE DHRGWFERTF CMEEMAGAGL KTGFVQHNSS YNHAAGTLRG 
MHYQRAPHSE VKVITCTRGR IQDVIIDLRP DSPTYLKWEG FDLKAGDHRQ LYIPEGFAHG 
YLTLEDATAV SYLVSAAYTP GAEGGVRWDD PAFGIDWAAE VSVISEKDAA WPDFQPA