| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_0003 |
|---|
| Symbol | |
|---|
| ID | 3720257 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | - |
|---|
| Start bp | 1704748 |
|---|
| End bp | 1706277 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640071200 |
|---|
| Product | putative site-specific recombinase |
|---|
| Protein accession | YP_353073 |
|---|
| Protein GI | 77463569 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.385186 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTCGG CTATCCAGAT CAAAGGGGAC TCATTTAGAC GGCAGGCAGA AGCTTCCGCG
AAGTATGCCG CCGAACATGA TCTTGACCTT ATCGATGACT ACAAGCTTGC CGATCTCGGG
GTCTCTGCCT TCAAGTCGGA CAACCTGACT ACCGGGGCTC TCGGACGATT TGTTGCCGAG
TGTGAGGCGG GAGAGATTGA GGCAGGATCG TTCCTTCTCA TCGAAAGCCT TGACCGTTTG
AGTCGAGACA AGATCCTTGA TGCATTTTCC CTGTTTGCTC GCATTCTCAA GACCGGGGTG
AAGATCGTTA CCCTGTCGGA TGGGCAGGTT TACGATGGAT CGTCAGATCA GGTTGGAAGC
ATTTACTACG CCATTTCAGT AATGATCCGG TCCAATGACG AGTCTAAGAT CAAATCGACT
CGTGGTCTCG CCAACTGGTC GCAGAAGCGG AAGCTTGCTG CCGAACATGG CGTCAAAATG
TCGAGTCAAT GCCCTGCATG GCTTAAGCTG TCCGTTGATC GCAAGTCTTA CCTGATCGAT
AAGGAACGGG CCAAAATCGT TCAACGCATC TTCGAAGCTT CGGCATCGGG TAAAGGTGCG
AACCTCATCA CCAAAGAACT GAATCGCGAC AAGGTTCCGA CATTCGGAAG GGGCGCTTTG
TGGGCCGAAG CTTTCGTCTC CAAGACGCTT CGCAATCGTG CAGTCCTCGG GGAATTTCAG
CCGGGGCAGT ATGTCAGTGG AAAGCGTCAA CCGGCTGGTG ATCCTATTCC GGGATATTTC
CCTCCCGTAA TCGAGGAAGA GCTTTTCGAC ATTGTTCAAG CATCGCTGAG AGGGCGGTTG
CTTGCCGGGG GAAGAAGGGG AGAGGGTCAA TCGAACATCT TCACCCATGT TGCTTTCTGC
GGCTATTGCG GATCAAAGAT GCGCCATCGG TCGAAAGGAT CACGGGTAAA GGGCAATCCT
CCGCATCGTT ACCTGACATG CTTCAACCGC TTTAATGGTC CGGGATGCGA TTGCAAACCT
CTCCCTTACG CTGCCTTCGA ACGCTCCTTC CTGACATTTG TTCGGGATGT TGATTTGAGG
GGACTTCTGG AAGGTGCAAA GCGCAAGTCC GAAGCAAAGA CGATTGCGGA TCGGATAACG
GTCAATGAAG AGAAAGTTAG AAAGGCAGAT GAGAGAATTC GGGATTATCT GATCAAGATC
GAAGGTGCTC CCGATCTTGC GGAAATCTTC ATGGAGCGCA TTCGGGAATT GAAAGCCGAG
AAGGATGATC TTGTTCGATC TATCGAGGAA TCGAATGATG CTCTTTCGAA GATCAAGTCG
GATAACGTGA CCGACGAGGA ACTAGCATCC CTGATTTCGA CGTTCCAAAT CCATGCGGGG
AAAATCGTAT TAGGCTTGCG GATCGTATCA AATCGATCAT TGAGCGCATT GACGTCTATC
CGAATGGTGA AATCCGCAAA GATGATCCGG CGATTGATCT TGTGCGCGCT TCGGGAGATC
CTGATGCCGA AAAGATCATT GCGGCAATGA
|
|---|
| Protein sequence | MSSAIQIKGD SFRRQAEASA KYAAEHDLDL IDDYKLADLG VSAFKSDNLT TGALGRFVAE
CEAGEIEAGS FLLIESLDRL SRDKILDAFS LFARILKTGV KIVTLSDGQV YDGSSDQVGS
IYYAISVMIR SNDESKIKST RGLANWSQKR KLAAEHGVKM SSQCPAWLKL SVDRKSYLID
KERAKIVQRI FEASASGKGA NLITKELNRD KVPTFGRGAL WAEAFVSKTL RNRAVLGEFQ
PGQYVSGKRQ PAGDPIPGYF PPVIEEELFD IVQASLRGRL LAGGRRGEGQ SNIFTHVAFC
GYCGSKMRHR SKGSRVKGNP PHRYLTCFNR FNGPGCDCKP LPYAAFERSF LTFVRDVDLR
GLLEGAKRKS EAKTIADRIT VNEEKVRKAD ERIRDYLIKI EGAPDLAEIF MERIRELKAE
KDDLVRSIEE SNDALSKIKS DNVTDEELAS LISTFQIHAG KIVLGLRIVS NRSLSALTSI
RMVKSAKMIR RLILCALREI LMPKRSLRQ
|
|---|
| |