| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5742 |
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| Symbol | trmE |
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| ID | 3714467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 6434473 |
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| End bp | 6435843 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_351466 |
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| Protein GI | 77461959 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.206283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAC CTCGTGAAAC CATCGCAGCT GTCGCCACCG CCCAGGGCCG TGGCGGCGTG
GGCATCGTTC GAATTTCCGG GCCGCTGGCC AGTGTTGCGG CCAAAGCCAT CAGCGGCCGC
GAGCTGAAAC CGCGGTTTGC CCACTACGGC CCGTTCTTCA GTGACAATCA ACAGGTGCTG
GATGAAGGCC TGGCGCTGTA TTTCCCCGGG CCGAACTCGT TCACTGGCGA AGACGTACTG
GAACTGCAGG GCCACGGTGG TCCGATCGTC CTCGACATGT TGCTCAAGCG TTGTCTGGAA
TTGGGCTGCC GTCTCGCGCG GCCCGGTGAG TTCAGCGAAA GAGCATTCCT TAATGACAAA
CTCGACCTGG CCCAGGCCGA GGCCATTGCC GACCTGATCG AAGCCAGTTC TGCACAGGCC
GCGAGAAACG CTCTGCGTTC GTTGCAAGGT GCATTTTCCC AACGTGTGCA TAACCTCACC
GAACAGCTGA TCGGTTTGCG GATTTATGTC GAGGCTGCCA TCGACTTCCC GGAAGAAGAA
ATCGACTTCC TCGCCGATGG CCATGTCCTG AGCATGCTCG ACAAGGTTCG TAACGAGTTA
TCCACCGTAT TGCGCGAAGC CGGGCAGGGT GCGTTGCTGC GTGACGGCAT GACCGTGGTG
ATTGCCGGTC GTCCGAATGC CGGCAAATCC AGTCTGCTGA ATGCACTGGC CGGCCGTGAA
GCCGCGATCG TGACCGAAAT CGCCGGTACC ACTCGGGATA TCCTGCGTGA ACATATCCAC
ATCGATGGCA TGCCGCTGCA TGTCGTGGAT ACCGCAGGTC TGCGTGATAC CGATGATCAT
GTGGAAAAGA TCGGCGTTGA ACGAGCGTTG AAAGCCATCG GCGAGGCTGA TCGAGTACTG
CTGGTCGTCG ATGCCACGGC GCCTGAGGCC GCTGATCCGT TCGCCCTGTG GCCGGAATTC
CTCGAAACCC GACCGGATCC GGCGAAGGTT ACATTGATCC GTAACAAGGC CGATCTCACG
GGTGAGCCCA TTGCCTTGGA AGTCAGTGAC GATGGCCATG TGACGATCAG CCTGAGCGCC
AAATCTGCGG GAGAGGGTCT GGATCTGCTG CGTGATCACC TCAAGGCTTG CATGGGCTAC
GAACAAACAT CGGAAAGCAG CTTCAGCGCA CGCCGCCGGC ACCTGGAAGC CCTGCGTCAT
GCCAGTGATG CCCTGGAACA TGGACGTGCC CAACTGACGT TGGCGGGTGC TGGTGAGCTG
CTGGCCGAAG ACCTGCGTCA GGCCCAACAG TCTCTTGGGG AAATCACCGG CGCCTTCAGT
TCAGATGATT TGCTGGGACG AATCTTTTCC AGCTTCTGCA TCGGTAAATA A
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| Protein sequence | MSAPRETIAA VATAQGRGGV GIVRISGPLA SVAAKAISGR ELKPRFAHYG PFFSDNQQVL
DEGLALYFPG PNSFTGEDVL ELQGHGGPIV LDMLLKRCLE LGCRLARPGE FSERAFLNDK
LDLAQAEAIA DLIEASSAQA ARNALRSLQG AFSQRVHNLT EQLIGLRIYV EAAIDFPEEE
IDFLADGHVL SMLDKVRNEL STVLREAGQG ALLRDGMTVV IAGRPNAGKS SLLNALAGRE
AAIVTEIAGT TRDILREHIH IDGMPLHVVD TAGLRDTDDH VEKIGVERAL KAIGEADRVL
LVVDATAPEA ADPFALWPEF LETRPDPAKV TLIRNKADLT GEPIALEVSD DGHVTISLSA
KSAGEGLDLL RDHLKACMGY EQTSESSFSA RRRHLEALRH ASDALEHGRA QLTLAGAGEL
LAEDLRQAQQ SLGEITGAFS SDDLLGRIFS SFCIGK
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