Gene Pfl01_5685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5685 
Symbol 
ID3713677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6370302 
End bp6371552 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content63% 
IMG OID 
ProductABC transporter-like 
Protein accessionYP_351412 
Protein GI77461905 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0795174 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.634912 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCACA TACGCGTCAC TGGCCTGGGC AAGGCCTACA AACAGTACCC AACTCGCTGG 
AGCCGCCTGG CGGAATGGCT GATTCCGTTT TCGCCGATGC GCCATCGCCA GCACTGGGTG
CTGCAGGACG TGAATTTCGA AATCGCCCCC GGTGAAGCGG TGGGCATTGT CGGGGTCAAC
GGCGCCGGAA AAAGCACCTT GCTCAAGATG ATCACCGGCA CCACCCAACC GACCTGCGGC
CAGATTCAGC TCGAGGGCCG GGTCGCGGCG CTGCTGGAAC TGGGCATGGG TTTTCATCCG
GACTTCACCG GTCGGCAGAA TGCAGTGATG GCCGGGCAAC TGCTGGGCAT GCAGGTCGAA
GACATCGAAG CACTCATGCC GGACATTGAA CGCTTCGCGG AAATCGGCGA GGCCATCGAT
CACCCGGTGC GCACCTACTC CAGCGGCATG CAGATGCGCC TGGCCTTCAG CGTCGCCACC
GCGCGACGCC CGGACATTCT GATCGTCGAC GAAGCGCTGT CGGTGGGCGA TGCCTACTTC
CAGCACAAGA GCTTCGACCG CATCCGCAGC TTCCGCAAGG CTGGCACCAC GCTGCTGATC
GTGTCCCACG ACCGCTCGGC GATCCAGTCG ATCTGCGACT CGGCGATCCT GCTCGAAGGC
GGCCACATGG TGATGCACGA CAAGCCCGAA GCGGTCATGG ATTACTACAA CGCCCTGCTT
GCTGAACGCG AAGGCCAGAC CGTGCGCCAG GAACTGCTCG ACGGCGGACA AGTGCGCACC
GTGTCCGGCA CCGGCGAGGC CGGGATCCTC AGCGTACGCC TGCTCGATGA ACGCGAACGT
TCCATCGACG CTGCCGAAGT CGGTCAGCCG GTGACCCTGG AAGTCGAGGT AGAGATTCGC
CAGGACATCG AGCGGCTGGT GCTCGGCTTC ATGATCAAGG ATCGCCTGGG CCAGGCCATG
TACGGCATCA ATACCCACCG CCAGAATCAG GCGCTGGAAG ACCTGCGTGC GGGCGAGCGC
ATCACCTATC GCTTCGCGTT CGTCATGGGC CTGGGCAAGG GCAATTACTC CGTGGCCCTG
AGCCTGTCGC GACTGGACTC GCACCTGGAC CGCAACTTCG AATGGCGTGA CTACGGGCTG
GTGTTCCACG TGATCAACAA CCGTCAGGAA GATTTCGTCG GCTGTTCCTG GCTGGGCGCC
AGCACCTCGA TCACCCGCCA CGCGGACAGC CTCGCGGAGC GTGCGCCATG A
 
Protein sequence
MGHIRVTGLG KAYKQYPTRW SRLAEWLIPF SPMRHRQHWV LQDVNFEIAP GEAVGIVGVN 
GAGKSTLLKM ITGTTQPTCG QIQLEGRVAA LLELGMGFHP DFTGRQNAVM AGQLLGMQVE
DIEALMPDIE RFAEIGEAID HPVRTYSSGM QMRLAFSVAT ARRPDILIVD EALSVGDAYF
QHKSFDRIRS FRKAGTTLLI VSHDRSAIQS ICDSAILLEG GHMVMHDKPE AVMDYYNALL
AEREGQTVRQ ELLDGGQVRT VSGTGEAGIL SVRLLDERER SIDAAEVGQP VTLEVEVEIR
QDIERLVLGF MIKDRLGQAM YGINTHRQNQ ALEDLRAGER ITYRFAFVMG LGKGNYSVAL
SLSRLDSHLD RNFEWRDYGL VFHVINNRQE DFVGCSWLGA STSITRHADS LAERAP