Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5685 |
Symbol | |
ID | 3713677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 6370302 |
End bp | 6371552 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | ABC transporter-like |
Protein accession | YP_351412 |
Protein GI | 77461905 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0795174 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.634912 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGCACA TACGCGTCAC TGGCCTGGGC AAGGCCTACA AACAGTACCC AACTCGCTGG AGCCGCCTGG CGGAATGGCT GATTCCGTTT TCGCCGATGC GCCATCGCCA GCACTGGGTG CTGCAGGACG TGAATTTCGA AATCGCCCCC GGTGAAGCGG TGGGCATTGT CGGGGTCAAC GGCGCCGGAA AAAGCACCTT GCTCAAGATG ATCACCGGCA CCACCCAACC GACCTGCGGC CAGATTCAGC TCGAGGGCCG GGTCGCGGCG CTGCTGGAAC TGGGCATGGG TTTTCATCCG GACTTCACCG GTCGGCAGAA TGCAGTGATG GCCGGGCAAC TGCTGGGCAT GCAGGTCGAA GACATCGAAG CACTCATGCC GGACATTGAA CGCTTCGCGG AAATCGGCGA GGCCATCGAT CACCCGGTGC GCACCTACTC CAGCGGCATG CAGATGCGCC TGGCCTTCAG CGTCGCCACC GCGCGACGCC CGGACATTCT GATCGTCGAC GAAGCGCTGT CGGTGGGCGA TGCCTACTTC CAGCACAAGA GCTTCGACCG CATCCGCAGC TTCCGCAAGG CTGGCACCAC GCTGCTGATC GTGTCCCACG ACCGCTCGGC GATCCAGTCG ATCTGCGACT CGGCGATCCT GCTCGAAGGC GGCCACATGG TGATGCACGA CAAGCCCGAA GCGGTCATGG ATTACTACAA CGCCCTGCTT GCTGAACGCG AAGGCCAGAC CGTGCGCCAG GAACTGCTCG ACGGCGGACA AGTGCGCACC GTGTCCGGCA CCGGCGAGGC CGGGATCCTC AGCGTACGCC TGCTCGATGA ACGCGAACGT TCCATCGACG CTGCCGAAGT CGGTCAGCCG GTGACCCTGG AAGTCGAGGT AGAGATTCGC CAGGACATCG AGCGGCTGGT GCTCGGCTTC ATGATCAAGG ATCGCCTGGG CCAGGCCATG TACGGCATCA ATACCCACCG CCAGAATCAG GCGCTGGAAG ACCTGCGTGC GGGCGAGCGC ATCACCTATC GCTTCGCGTT CGTCATGGGC CTGGGCAAGG GCAATTACTC CGTGGCCCTG AGCCTGTCGC GACTGGACTC GCACCTGGAC CGCAACTTCG AATGGCGTGA CTACGGGCTG GTGTTCCACG TGATCAACAA CCGTCAGGAA GATTTCGTCG GCTGTTCCTG GCTGGGCGCC AGCACCTCGA TCACCCGCCA CGCGGACAGC CTCGCGGAGC GTGCGCCATG A
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Protein sequence | MGHIRVTGLG KAYKQYPTRW SRLAEWLIPF SPMRHRQHWV LQDVNFEIAP GEAVGIVGVN GAGKSTLLKM ITGTTQPTCG QIQLEGRVAA LLELGMGFHP DFTGRQNAVM AGQLLGMQVE DIEALMPDIE RFAEIGEAID HPVRTYSSGM QMRLAFSVAT ARRPDILIVD EALSVGDAYF QHKSFDRIRS FRKAGTTLLI VSHDRSAIQS ICDSAILLEG GHMVMHDKPE AVMDYYNALL AEREGQTVRQ ELLDGGQVRT VSGTGEAGIL SVRLLDERER SIDAAEVGQP VTLEVEVEIR QDIERLVLGF MIKDRLGQAM YGINTHRQNQ ALEDLRAGER ITYRFAFVMG LGKGNYSVAL SLSRLDSHLD RNFEWRDYGL VFHVINNRQE DFVGCSWLGA STSITRHADS LAERAP
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