| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5678 |
|---|
| Symbol | |
|---|
| ID | 3712974 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 6362026 |
|---|
| End bp | 6362910 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_351405 |
|---|
| Protein GI | 77461898 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.622302 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.945039 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGCG CATGGCTGAG GCGTTTGCGT CCGGTTGCGC CATCGGTGCC GGACTCTCTG
CCGGATCCTG TGTCCGTCAG CGTGTCGCCG CGGGACGTCG GCCTGCACGA TGCCATGCTC
GACGGGTGGT TTCACGGCGA CAGTGGCGAG TTGCTCAAGG GCTTTGCCAT TGACGCGGAC
GACACCCTGC TCGACGTGGG GTGCGGTGAG GGCGTGGCGA CATTGTTCGC CGTGCGCCAG
GGGGCCTCGG TGATCTTCAC CGACAGCGAG CACGACAAAG TCCGCGATCT CGCCCGGCAA
GTCGAGGCGC AGAGCCGCAA CGCCAGCCTC GGTCTGGTCA GCAACAGCCT GCCATTGCCG
CTGAGCGACG GCTGTGCGAG CAAGGTTGTG TGCATGGAAG TGCTGGAACA CATCGACCAG
CCCGAGCCGT TCATGGCCGA GCTGGTACGC ATGGGCCGGC CCGGTGCGCT GTACCTGCTC
AGTGTGCCGG CGCCGGTAGG CGAGCATTTG CAGCAGGGCA TTGCCCCGGC GGGTTATTAC
CAGTCACCCA ATCATGTGCA GATCTTTACC CCGGAACGCT TCGCGGCACT GGTGGAGGAG
GCCGGTCTGG TGATCGAGCA TCGTCAGGCC ACGGGGTTTT TCTGGGTCAT GGGCATGATT
TTTTTCTGGG CCAGCGAACG CGCTGCCGGG CGTGACCTCG GAGGCGCCGT GCGCGACCGG
ATCCAGGCGC CGTATCCACC GTTGATGGAG AGTTGGGCCA GAACCTGGCA GGACTTGCTG
GCGCAGCCAG ACGGTTTGGC GATCAAGCAG ATGCTCGACC GGTTCATGCC CAAGAGTCAG
GTGATCATCG CCCGCAAACC GCTCGATGCA GGACGAGTGT CATGA
|
|---|
| Protein sequence | MIRAWLRRLR PVAPSVPDSL PDPVSVSVSP RDVGLHDAML DGWFHGDSGE LLKGFAIDAD
DTLLDVGCGE GVATLFAVRQ GASVIFTDSE HDKVRDLARQ VEAQSRNASL GLVSNSLPLP
LSDGCASKVV CMEVLEHIDQ PEPFMAELVR MGRPGALYLL SVPAPVGEHL QQGIAPAGYY
QSPNHVQIFT PERFAALVEE AGLVIEHRQA TGFFWVMGMI FFWASERAAG RDLGGAVRDR
IQAPYPPLME SWARTWQDLL AQPDGLAIKQ MLDRFMPKSQ VIIARKPLDA GRVS
|
|---|
| |