Gene Pfl01_5672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5672 
Symbol 
ID3712968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6355453 
End bp6355926 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content63% 
IMG OID 
ProductAsnC family transcriptional regulator 
Protein accessionYP_351399 
Protein GI77461892 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCG ATGCCTTCGA CCGCAAGATT CTCGCCGCGC TGCAACGGGA CGGGCGCCTG 
AGCAACGTGC AGTTGGCCGA CGAAATCGGT CTGTCGGCAT CGCCGTGCCT GCGCCGGGTG
CGAATGCTGG AGGAGGCCGG GGTGATTCGC GGTTATCAGG CCAACCTGGA TCGTGATGAA
GTGGGGTTGG GGCTGACGGT GTTTGTCGGG GTCAAGGTCG AGCGGCACAA CGACGAACAG
GCCGAGGCGT TTCATCGGGC GGTGACGGCG TTGCCGGAGG TGATTTCGGC GTTTCTGGTG
TCCGGGGAAT CGGACTTTCT GCTGCAAGTG GTGGTGCCGG ATCTGCGCGC CTATGACCGC
TTTCTCACCG GTTGCCTGTT GAAGCTGCCG GGAGTGAGCG ATATCCGCAG CAATTTTGCG
ATCCACACGG TGAAGACACC CGGCGCGTTG CCGCTGGGGC ATCTGCCGTC CTGA
 
Protein sequence
MKLDAFDRKI LAALQRDGRL SNVQLADEIG LSASPCLRRV RMLEEAGVIR GYQANLDRDE 
VGLGLTVFVG VKVERHNDEQ AEAFHRAVTA LPEVISAFLV SGESDFLLQV VVPDLRAYDR
FLTGCLLKLP GVSDIRSNFA IHTVKTPGAL PLGHLPS