Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5661 |
Symbol | |
ID | 3712957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 6341564 |
End bp | 6342439 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | periplasmic solute binding protein |
Protein accession | YP_351388 |
Protein GI | 77461881 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.203291 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGCTC TACTCGTGCT GTTCAGCCTG ATGCTGTCGA TGTCGTTATC GGCGGCGGAA AAACTGCCGG TGGTCACCAG TTTCAGCATC CTTGCCGACA TGGTGCATCA GGTCGGCGGC GAGCATATCC AGATCACCAA CATGGTCGGC CCTGACGCCG ATGCCCACAC TTACGAACCC ACTCCAGATG ACGCCAAGGC ACTGCTCAAG GCAAAGCTGA TCATCAAGAA CGGACTGGGT TTCGAGCCCT GGCTGGATCG GCTGATCGCC AGCACCGACA CCAGAGCCCC GGTGATCAGC GCCAGTCGCG GCGTGATTCC GCGCTCGCTG GATGAGGACG GCGAAACCGT CCCCGACCCT CACGCGTGGC ACAACCTGGC GAATGCCGAG CTGTACGTCG CCAACATCAC CAAAGCGCTG ATCGCTGCTG ACCCGGCCAA CAAAGCCGAC TACGAGCGCA ACAGCCAGGC TTACCTGAAA CAGATCTACG CCCTCCTCGC CCAAGCGAAA ACCAAGCTCG GTTCATTGCC GCCGGGCAAC CGCAAGATCG TCACCAGCCA CGACGCGTTC GGCTATCTCG GTCAGGCCTA CGGCATCGAC TTCATGGCGC CACAAGGTCT GTCCACCGAG CGCGAGCCCT CCGCTGCCGA AGTCGCCGCG CTGATCACCC AGATTCGCCA GGCCAAAGTC AAAGCGGTGT TCATGGAAAA CATCAAGGAC GCGCGCCTGT TGAAACAGAT CGCCGACGAA AGCGGCGCAC ACATCGGCGG CACGCTGTAC TCCGACGCCC TCGCCGCCAG CGGCCCGGCC AGCACCTTTA CCGGGCTGTT CGAATACAAC CTCAACACCC TCTACCAAGC CCTGAGCCAA CCATGA
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Protein sequence | MRALLVLFSL MLSMSLSAAE KLPVVTSFSI LADMVHQVGG EHIQITNMVG PDADAHTYEP TPDDAKALLK AKLIIKNGLG FEPWLDRLIA STDTRAPVIS ASRGVIPRSL DEDGETVPDP HAWHNLANAE LYVANITKAL IAADPANKAD YERNSQAYLK QIYALLAQAK TKLGSLPPGN RKIVTSHDAF GYLGQAYGID FMAPQGLSTE REPSAAEVAA LITQIRQAKV KAVFMENIKD ARLLKQIADE SGAHIGGTLY SDALAASGPA STFTGLFEYN LNTLYQALSQ P
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