Gene Pfl01_5633 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5633 
Symbol 
ID3717466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6308603 
End bp6310156 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content65% 
IMG OID 
ProductGntR family transcriptional regulator 
Protein accessionYP_351360 
Protein GI77461853 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.15538e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.236104 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGATT CGACCACGCT GTCGCTGCCG TTCAACCCTG CCGGTATCGA ACTCGACCGC 
CGCAAAGGCC TGAGCCGTCA GCTCTATCAG GCCTTGCGCC TGCGGGTGCT CGACGGGCGC
CTGGCCAGCG GCACGCGCCT GCCGGCCAGC CGCGATCTGG CGGCAGCGTT GGGGATTTCC
CGCAACAGTG TGGTGCGTGC CTACGATCAA CTGTATGCCG AAGGTTTCAT TGAAGGCCGG
GTCGGGGATG GCACTTATGT GGCGCAGTTA CCGCAATCGG TGGCGCCCGC GAAAAAATTA
TCCACAAAAG TATCCACAGG GTTTTCAACA GGCTTACCCA CAGCCTTATC CACAATTTCG
GCCAATTCAA CTGGGGATTT ATCCAGCAAG GTTATCCACA GCGGTGCATT GCAGCGGCTT
GAGCAGAACC ATTTGCCGAC GCCACCAAGC GGTCCGCCGC GAGCATTCCG GGTCGGTGTT
CCGGCGTTCG ATCTGTTCCC GTTCGACGTC TGGGCCAAGC TGAGCGCGGC GTTCTGGCGC
AAACCCGATT TGCAGCAACT GTGTTACGGC GACCCGGCGG GCGATGCGCG CCTGCGCGGG
CTGATCGCCG CTTATTTGCG CAGTTCGCGC GGCATGCAGT GCTCGGCTGA GCAAATTGTG
ATCACCAGTG GCGCGCAACA GGGAATCAGC CTTTGTGCAC AGTTGCTGGT GGAGCCGGGC
GCCGGCGTGG GCATCGAGAA TCCCGGCTAT CGCGCAGCGG GTCATGCGTT CGCCTTGGCC
GGCGGTCGAT TGCACGGCAT TGCGGTGGAT GAGGAGGGCA TCGACTGCGC GGCACTGGCG
GCCGCCGAAG ATTGCCGGGT GGCGTATGTC ACACCGTCTC ATCAATACCC GACCGGGGTG
GTGATGAGCC TGGCGCGACG TCTGGAACTG CTGGCCTGGG CCGAGCGCAC CGGCGGCTGG
ATCGTCGAGG ACGACTACGA CGGCGAGTAT CGCTACACCG GCGCACCCTT GGCCCCGCTG
GCGGCGCTCG ACCGCCAGGG CCGCGTGTTG TATGTCGGCA CCTTCGGCAA AGTCGCGTTC
CCCGCGCTGC GCCTGGGGTA TCTGGTGTTG CCGCCGACAC TGGTGGAGGC GTTTGCGCAG
CGGCGGGCGG TGGATGTCCG GCATTCCGAA GTGAGCACTC AAGCGGTGAT GGCCGAATTC
ATGGCGGCCG GGCACTTTCA GCGGCACATC CGGCGGATGC GTCGGGCAGC CCTGAGTCGG
CGTAACGCAC TCATCAATGG TTGGCCGCAA GGATTGGCGG GTGTGGGGGA ATTGCCGGCG
GTGTCAGCGG GGCTGCATCT CACCGTGGCG GTCGACAGTG TGGCCCGCGA ACAACAGTTG
ATCGAGCAGG CCGCCAGCGT GGAGGTGGAG ATCCATGGCT TGAGCAAATA TTGGCTGCCG
GACTCGACGA CGCCGCTCGA TCAGCGCGCC GGTCTGGTGC TGGGTTTTGC GGCGGTGCCG
GAGCCGGCGA TCGAGTCGGC CCTGGCCCGT TTGCGGCAAG CCTGGGGTGA GTGA
 
Protein sequence
MPDSTTLSLP FNPAGIELDR RKGLSRQLYQ ALRLRVLDGR LASGTRLPAS RDLAAALGIS 
RNSVVRAYDQ LYAEGFIEGR VGDGTYVAQL PQSVAPAKKL STKVSTGFST GLPTALSTIS
ANSTGDLSSK VIHSGALQRL EQNHLPTPPS GPPRAFRVGV PAFDLFPFDV WAKLSAAFWR
KPDLQQLCYG DPAGDARLRG LIAAYLRSSR GMQCSAEQIV ITSGAQQGIS LCAQLLVEPG
AGVGIENPGY RAAGHAFALA GGRLHGIAVD EEGIDCAALA AAEDCRVAYV TPSHQYPTGV
VMSLARRLEL LAWAERTGGW IVEDDYDGEY RYTGAPLAPL AALDRQGRVL YVGTFGKVAF
PALRLGYLVL PPTLVEAFAQ RRAVDVRHSE VSTQAVMAEF MAAGHFQRHI RRMRRAALSR
RNALINGWPQ GLAGVGELPA VSAGLHLTVA VDSVAREQQL IEQAASVEVE IHGLSKYWLP
DSTTPLDQRA GLVLGFAAVP EPAIESALAR LRQAWGE