Gene Pfl01_5631 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5631 
Symbol 
ID3717464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6306421 
End bp6307446 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content62% 
IMG OID 
Producthistone deacetylase superfamily protein 
Protein accessionYP_351358 
Protein GI77461851 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.576277 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.22086 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACGA TCTACTCTGA CGATCACCAC CTGCACCATG GCCGCTGCGA ATTGATCGAC 
GGGCAACTCA AGCCTTGCTT CGAGATGCCG TCGCGCGCCG ACCACGTGCT GCAACGGGTA
AAAAATCAAA ACCTCGGCCC GGTCGAGGCA CCGAAGGATT TCGGCCTCGG GCCGATCGAG
CGCATTCACA GCCGCGACTA CCTCGACTTT TTCAAAGGCG CGTGGGCACG CTGGACCGAG
TTCAACACCG ACGGCGACTT GCTGCCTTAC ACCTGGCCGG CGCGCACCTT GCGTCAGGTC
AAGCCGACCA GCCTGCACGG CCAGCTCGGC TATTACAGCT TCGACGGAGG CGCGCCGATC
ACCGCCGGCA CCTGGCAAGC GGCGTACAGC GCGGCGCAAG TGGCGCTGAC CGCACAAGCG
GAAATCCAGC GCGGCGCCCG CGGTGCCTTC GCCCTGTGCC GTCCACCGGG ACACCACGCT
GCCGGTGATT TGATGGGCGG TTATTGCTAC CTCAACAACG CCGCCATCGC CGCGCAGGCA
TTCCTCGATC AGGGCCACAA GAAGGTCGCG ATCCTCGACG TCGACTACCA CCACGGCAAT
GGCACCCAAT CGATTTTCTA CGAGCGCAGC GACGTGCTGT TCACCTCGAT CCATGGCCAC
CCGGAAGCGG AATTCCCGTT CTTCCTCGGC TACGAAGACG AACGCGGGGA AGGCGCCGGG
GAAGGCTTCA ACTTCAACTA TCCGCTGCCA GCCGGTTCCG GCTGGGATAT CTGGAGTGCG
GCACTGGATC AGGCCTGCCA GGAGATCGAC AACTACGGCG CCGACATCAT CGTCGTGTCG
CTGGGTGTGG ACACCTTCAA GGACGATCCG ATTTCGCAGT TCAAGCTCGA CAGCCCGGAC
TACCTGGCCA TGGGCAAGCG CATCGCGGCC CTCGGCAAAC CGACCCTGTT CGTCATGGAA
GGTGGCTACG CGGTGGAAGA AATCGGCATC AACGCGGTGA ACGTGCTTGA AGGTTTCGAA
CAATGA
 
Protein sequence
MLTIYSDDHH LHHGRCELID GQLKPCFEMP SRADHVLQRV KNQNLGPVEA PKDFGLGPIE 
RIHSRDYLDF FKGAWARWTE FNTDGDLLPY TWPARTLRQV KPTSLHGQLG YYSFDGGAPI
TAGTWQAAYS AAQVALTAQA EIQRGARGAF ALCRPPGHHA AGDLMGGYCY LNNAAIAAQA
FLDQGHKKVA ILDVDYHHGN GTQSIFYERS DVLFTSIHGH PEAEFPFFLG YEDERGEGAG
EGFNFNYPLP AGSGWDIWSA ALDQACQEID NYGADIIVVS LGVDTFKDDP ISQFKLDSPD
YLAMGKRIAA LGKPTLFVME GGYAVEEIGI NAVNVLEGFE Q