Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5631 |
Symbol | |
ID | 3717464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 6306421 |
End bp | 6307446 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | histone deacetylase superfamily protein |
Protein accession | YP_351358 |
Protein GI | 77461851 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.576277 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.22086 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGACGA TCTACTCTGA CGATCACCAC CTGCACCATG GCCGCTGCGA ATTGATCGAC GGGCAACTCA AGCCTTGCTT CGAGATGCCG TCGCGCGCCG ACCACGTGCT GCAACGGGTA AAAAATCAAA ACCTCGGCCC GGTCGAGGCA CCGAAGGATT TCGGCCTCGG GCCGATCGAG CGCATTCACA GCCGCGACTA CCTCGACTTT TTCAAAGGCG CGTGGGCACG CTGGACCGAG TTCAACACCG ACGGCGACTT GCTGCCTTAC ACCTGGCCGG CGCGCACCTT GCGTCAGGTC AAGCCGACCA GCCTGCACGG CCAGCTCGGC TATTACAGCT TCGACGGAGG CGCGCCGATC ACCGCCGGCA CCTGGCAAGC GGCGTACAGC GCGGCGCAAG TGGCGCTGAC CGCACAAGCG GAAATCCAGC GCGGCGCCCG CGGTGCCTTC GCCCTGTGCC GTCCACCGGG ACACCACGCT GCCGGTGATT TGATGGGCGG TTATTGCTAC CTCAACAACG CCGCCATCGC CGCGCAGGCA TTCCTCGATC AGGGCCACAA GAAGGTCGCG ATCCTCGACG TCGACTACCA CCACGGCAAT GGCACCCAAT CGATTTTCTA CGAGCGCAGC GACGTGCTGT TCACCTCGAT CCATGGCCAC CCGGAAGCGG AATTCCCGTT CTTCCTCGGC TACGAAGACG AACGCGGGGA AGGCGCCGGG GAAGGCTTCA ACTTCAACTA TCCGCTGCCA GCCGGTTCCG GCTGGGATAT CTGGAGTGCG GCACTGGATC AGGCCTGCCA GGAGATCGAC AACTACGGCG CCGACATCAT CGTCGTGTCG CTGGGTGTGG ACACCTTCAA GGACGATCCG ATTTCGCAGT TCAAGCTCGA CAGCCCGGAC TACCTGGCCA TGGGCAAGCG CATCGCGGCC CTCGGCAAAC CGACCCTGTT CGTCATGGAA GGTGGCTACG CGGTGGAAGA AATCGGCATC AACGCGGTGA ACGTGCTTGA AGGTTTCGAA CAATGA
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Protein sequence | MLTIYSDDHH LHHGRCELID GQLKPCFEMP SRADHVLQRV KNQNLGPVEA PKDFGLGPIE RIHSRDYLDF FKGAWARWTE FNTDGDLLPY TWPARTLRQV KPTSLHGQLG YYSFDGGAPI TAGTWQAAYS AAQVALTAQA EIQRGARGAF ALCRPPGHHA AGDLMGGYCY LNNAAIAAQA FLDQGHKKVA ILDVDYHHGN GTQSIFYERS DVLFTSIHGH PEAEFPFFLG YEDERGEGAG EGFNFNYPLP AGSGWDIWSA ALDQACQEID NYGADIIVVS LGVDTFKDDP ISQFKLDSPD YLAMGKRIAA LGKPTLFVME GGYAVEEIGI NAVNVLEGFE Q
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