Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5625 |
Symbol | aspA |
ID | 3717459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 6298662 |
End bp | 6300098 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | aspartate ammonia-lyase |
Protein accession | YP_351353 |
Protein GI | 77461846 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.149238 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.246318 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTCTA TCATGTCCTC CGCTGCATCA TTCCGCACAG AAAACGACCT GCTTGGCACC CTCGAAGTCC CTGCTCAAGC GTATTACGGC ATCCAGACCC TGCGAGCGGT GAACAACTTC CGTCTCTCCG GCGTTCCGAT TTCGCACTAC CCGAAGCTGG TTGTCGGTCT GGCGATGGTC AAACAGGCTG CCGCTGACGC CAACCGCGAG CTGGGTCACC TGAGCGAAGC CAAGCACGCT GCCATCAGCG AAGCCTGTGC CCGTCTGATC CGCGGCGATT TCCACGAAGA GTTCGTGGTC GACATGATTC AAGGTGGCGC CGGTACCTCC ACCAACATGA ACGCCAACGA AGTGATCGCC AACATCGCGC TGGAAGCGAT GGGTCACCAG AAAGGCGAAT ACCAGTACCT GCACCCGAAC GACGACGTGA ACATGGCGCA GTCGACCAAC GACGCCTATC CGACCGCGAT CCGTCTGGGT CTGCTGCTGG GTCACGACGC GCTGCTGGCC AGCCTCGACA GCCTGATTCA GGCGTTCGCG GCCAAGGGTG AAGAATTCAA TCACGTCCTG AAGATGGGCC GTACCCAACT GCAAGACGCC GTACCGATGA CCCTGGGTCA GGAATTCCGT GCTTTCGCCA CCACCATGGG CGAAGACCTG GCCCGTCTGA AGACGCTGGC CCCGGAACTG CTGACTGAAG TGAACCTGGG CGGCACCGCG ATCGGTACCG GCATCAACGC TGACCCGCGT TACCAGGCCC TGGCCGTACA GCGTCTGGCG CTGATCAGCG GTCAACCGCT GGTTCCAGCC GCCGACCTGA TCGAAGCCAC CTCCGACATG GGCGCCTTTG TACTGTTCTC TGGCATGCTC AAGCGCACCG CGGTCAAACT GTCGAAGATC TGCAACGACC TGCGCCTGCT GTCCAGCGGC CCGCGCACCG GCATCAACGA AATCAACCTG CCGGCGCGTC AGCCAGGCAG CTCGATCATG CCAGGCAAGG TCAACCCGGT AATCCCGGAA GCCGTGAACC AGGTGGCATT CCAAGTCATC GGTAACGATC TGGCGCTGAC CATGGCAGCC GAAGGCGGCC AACTGCAGCT GAACGTGATG GAGCCGCTGA TCGCCTTCAA GATCCTCGAC TCGATCCGCC TGCTGCAACG CGCCATGGAC ATGCTGCGCG AGCACTGCAT CGTCGGCATC ACCGCCAACG AAGCGCGCTG CCGCGAACTG GTCGAACACT CGATCGGCCT GGTCACCGCA CTGAACCCGT ACATCGGCTA CAAAAACGCC ACCCGCATCG CCCGTATCGC CCTTGAAAGC GGCCGCGGCG TACTGGAACT GGTGCGCGAA GAAGGTCTGC TCGACGAAGC CATGCTCGCC GACATCCTGC GCCCGGAAAA CATGATTGCT CCGCGTCTGG TGCCTCTGAA GGCCTGA
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Protein sequence | MISIMSSAAS FRTENDLLGT LEVPAQAYYG IQTLRAVNNF RLSGVPISHY PKLVVGLAMV KQAAADANRE LGHLSEAKHA AISEACARLI RGDFHEEFVV DMIQGGAGTS TNMNANEVIA NIALEAMGHQ KGEYQYLHPN DDVNMAQSTN DAYPTAIRLG LLLGHDALLA SLDSLIQAFA AKGEEFNHVL KMGRTQLQDA VPMTLGQEFR AFATTMGEDL ARLKTLAPEL LTEVNLGGTA IGTGINADPR YQALAVQRLA LISGQPLVPA ADLIEATSDM GAFVLFSGML KRTAVKLSKI CNDLRLLSSG PRTGINEINL PARQPGSSIM PGKVNPVIPE AVNQVAFQVI GNDLALTMAA EGGQLQLNVM EPLIAFKILD SIRLLQRAMD MLREHCIVGI TANEARCREL VEHSIGLVTA LNPYIGYKNA TRIARIALES GRGVLELVRE EGLLDEAMLA DILRPENMIA PRLVPLKA
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