Gene Pfl01_5607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5607 
Symbol 
ID3717683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6278680 
End bp6280002 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content63% 
IMG OID 
ProductPAS/PAC sensor Signal transduction histidine kinase 
Protein accessionYP_351335 
Protein GI77461828 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCAAA ACTGGCATGG CACCCTGATC CGCCACATGC TGTTGCTGGT CACCGGCTGC 
CTGGTGATCG GCCTGATCAC CGGCTACTAC GGCTGGAGTC TGGCGGCAGG CCTGGGCCTG
TACCTGGCCT GGACGCTCAA GCAACTGCTG CGCCTGCACG AATGGCTGCG CCTGCACCAA
CCCGATGAAG CACCGCCCGA CGGCTATGGC CTGTGGGGCG AGGTGTTCGA CAGCATCTAC
CACCTGCAAC GCCGCGACCA ACGGGTACGC GGGCGCCTGC AAGCGGTGAT CGACCGCGTC
CAGGAGTCCA CCGCTGCGCT GAAAGACGCG GTGATCATGC TCGACAGCGA CGGCAACCTG
GAATGGTGGA ACCGCGCCGC CGAAACCCTG CTCGGTCTCA AGACCCCGCA GGACAGCGGT
CAACCGGTGA CCAACCTCGT CCGCCATCCG CGCTTCAAGG AATACTTCGA GCAGGAAAGC
TACGCCGAAC CGCTGGAAAT CCCCTCGCCG ACCAACGATC GCGTACGCAT CCAGCTGTAC
CTCACGCGCT ACGGCAACAA CGAACACTTG ATGCTGGTGC GCGACGTCAC GCGCATCCAT
CAACTGGAAC AGATGCGCAA AGACTTCATC GCCAACGTCT CCCACGAGCT GCGCACCCCG
CTGACGGTGA TCTGCGGCTA CCTGGAAACC CTGCTCGACA ACGTTGAGGA AGTGAACCCG
CGCTGGAGCC GCGCCCTGCA GCAGATGCAG CAGCAGGGCG GGCGCATGCA GACCCTGCTC
AACGACTTGC TGTTGCTGGC CAAGCTGGAA GCCACCGATT ACCCGTCGGA CAATCAGCCG
GTGCACATCG ACACCCTGTT GCAGTCGATC AAGAGCGACG CCCAGCAGCT GTCAGGTTCG
AAGAATCAGA AAATCACCCT GGAAGCCGAC ACCAGCATTC TACTCAAGGG CAGCGAAGCG
GAACTGCGCA GTGCGTTTTC CAACCTGGTG TTCAACGCCG TCAAATACAC CCCGGCCGAA
GGCAATATCC GCATCCGCTG GTGGGGCGAC GATCAGGGTG CGCACCTGAG CGTGCAGGAT
TCCGGGATCG GCATCGACAG CAAACACCTG CCGCGCCTGA CCGAACGCTT CTACCGCGTC
GACTCCAGCC GCAACTCCAA CACCGGCGGC ACCGGCCTGG GCCTGGCCAT CGTCAAACAC
GTGCTGCTGC GCCATCGCGC ACGGATGGAG ATCAGCAGCG TGCCCGGTCA TGGCAGCACC
TTCACCTGCC ATTTCGCCCC GGCCCAGGTC GCTCAGGCAC GGGTCATCAG CGCCGCTGAG
TAA
 
Protein sequence
MNQNWHGTLI RHMLLLVTGC LVIGLITGYY GWSLAAGLGL YLAWTLKQLL RLHEWLRLHQ 
PDEAPPDGYG LWGEVFDSIY HLQRRDQRVR GRLQAVIDRV QESTAALKDA VIMLDSDGNL
EWWNRAAETL LGLKTPQDSG QPVTNLVRHP RFKEYFEQES YAEPLEIPSP TNDRVRIQLY
LTRYGNNEHL MLVRDVTRIH QLEQMRKDFI ANVSHELRTP LTVICGYLET LLDNVEEVNP
RWSRALQQMQ QQGGRMQTLL NDLLLLAKLE ATDYPSDNQP VHIDTLLQSI KSDAQQLSGS
KNQKITLEAD TSILLKGSEA ELRSAFSNLV FNAVKYTPAE GNIRIRWWGD DQGAHLSVQD
SGIGIDSKHL PRLTERFYRV DSSRNSNTGG TGLGLAIVKH VLLRHRARME ISSVPGHGST
FTCHFAPAQV AQARVISAAE