Gene Pfl01_5586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5586 
Symbol 
ID3713502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6259242 
End bp6261029 
Gene Length1788 bp 
Protein Length595 aa 
Translation table11 
GC content61% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_351314 
Protein GI77461807 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCTTTA ACCACTACTA CCAAAGCGAA CTCACCGCAC TGCGCCAGCT GGGCCGCCGT 
TTCGCCGAGC GTAGTCCGGC GTTGGCGCCG TTCCTGGGGC AGGCCGGGCG GGATCCGGAT
GTGGAGCGGT TGCTGGAAGG CTTTGCGTTT CTGACCGGGC GGCTGCGCCA GAAGCTCGAT
GACGAGTTGC CGGAGCTCAG CCATTCCCTG ATGCAGTTGT TGTGGCCGAA CTACATGCGC
CCGCTGCCTG CGTTCAGCAT TCTGCAGTTC GATCCGCTCA AGCGTTCCGG GCCGGCGCTG
AAGGTCGAGC GTGACACGCC GATCGAGAGC GTGCCGATCG AAGACGTGCG TTGCCGCTTT
CGCACCTGCT ACCCGACCGA AGTCATGGCG CTGGATCTGG CCGCGCTGAA CTACTCGGTG
AAGGGCGACG GTTCGCTGCT CAGCCTGCGC CTGGAGATGA GTGCCGACGG CCACCTCGGC
GAGCTTGAGC TGAGCAAGCT GCGCCTGCAC TTTGCCGGCG AGCGCTACAT CAGCCAGATG
CTCTACCTGA GCCTGCTGCG CAACCTCGAC GGCATCGAAC TTATCCCGCT CGACGGCGCC
GGCAAGCCGA TCGATGGCGT GAGCGGCAAG CCGATGGCGT TCAAGATTCC GGGCGACCGG
GTCAAACCGG TGGGCTTTGC CGAAGAAGAA GCGTTGATCC CGTATCCGCT GAACACTTTC
CGCGGCTATC GCTATCTGCA GGAATACTTC GCCTTCCAGG ACAAGTTCCT GTTCGTCGAT
GTCCACGGCC TCGACATCCT CAAGGCGCTG CCGGAAGACA CCCTCAAGCA GATGCGCGGC
CTGGAATTGC GCTTCGACAT CCGCAAGAGC GGCATCATGC GCATGCGTCC GACCCTTGAT
AACGTGAAGC TGTTCTGCAC GCCGATCGTC AACCTGTTCA AGCACGACGC ACTGCCGATC
CGCCTCGACG GCAAACAGGA TGAATACCTG CTGCTGCCGG CCGAATACGA TCTGGAAAAC
TGCGGCGTGT TCTCGGTTGA AACCGTGACC GGCTGGAAAC CCGGCGGCCT CGGTTATCAG
GAGTACGTGC CGTTCGAATC CTTCGAGCAC GACCCAAGTT TCGACGTGCC CAACAGCCGT
CCGCATTACA GCATCCGTCA GCGTTCGTCG CTGCTGCACG ACGGCCTCGA CACCTACCTG
AGCTTCGGCA TCCGCCACAC CGAAGCCCAT GAAACCCTGT CGATCGAGCT GGTCTGCACC
AACCAGAACC TGCCGCGCAA ACTCAAGCTC GGGCAGATCT GCATGGCCTG CGAAGAGACC
CCGGAGTTCC TGAGTTTCCG CAACATCACC CCGGCCACTT CGAGTTTTGC GCCGCCGCTG
AACCGTGACT TCCTGTGGAA GCTGATCAGC AACATGTCGC TTAACTATCT GTCGCTGGCC
GACGTCAATG CATTGAAGGT GATTCTCGAA ACCTACGACC TGCCGCGCTA CTACGACCAG
CACGCGGAGA AGGTCAGCAA ACGCCTGCTC GGCGGTCTCA AGCACATCAA GCATCACCAC
GTGGACCGCT TGCACCGTGG TTTGCCGGTG CGCGGTCTGC GCACCGAACT GACCATCGAC
CCGGAAGGGT ATATCGGCGA AGGCGACCTG TTCGTCTTCG CCTCGGTTCT CAACGAGTTT
TTCGCGCTTT ACGCCAGTCT CAATTCATTC CATGAGCTGC GGGTAAAAAG CACACAGGGA
GAGGTGTACC AATGGACACC ACGTATGGGC CTGCAGCCCC TGCTTTAA
 
Protein sequence
MSFNHYYQSE LTALRQLGRR FAERSPALAP FLGQAGRDPD VERLLEGFAF LTGRLRQKLD 
DELPELSHSL MQLLWPNYMR PLPAFSILQF DPLKRSGPAL KVERDTPIES VPIEDVRCRF
RTCYPTEVMA LDLAALNYSV KGDGSLLSLR LEMSADGHLG ELELSKLRLH FAGERYISQM
LYLSLLRNLD GIELIPLDGA GKPIDGVSGK PMAFKIPGDR VKPVGFAEEE ALIPYPLNTF
RGYRYLQEYF AFQDKFLFVD VHGLDILKAL PEDTLKQMRG LELRFDIRKS GIMRMRPTLD
NVKLFCTPIV NLFKHDALPI RLDGKQDEYL LLPAEYDLEN CGVFSVETVT GWKPGGLGYQ
EYVPFESFEH DPSFDVPNSR PHYSIRQRSS LLHDGLDTYL SFGIRHTEAH ETLSIELVCT
NQNLPRKLKL GQICMACEET PEFLSFRNIT PATSSFAPPL NRDFLWKLIS NMSLNYLSLA
DVNALKVILE TYDLPRYYDQ HAEKVSKRLL GGLKHIKHHH VDRLHRGLPV RGLRTELTID
PEGYIGEGDL FVFASVLNEF FALYASLNSF HELRVKSTQG EVYQWTPRMG LQPLL