Gene Pfl01_5583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5583 
Symbol 
ID3713499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6254065 
End bp6255591 
Gene Length1527 bp 
Protein Length508 aa 
Translation table11 
GC content65% 
IMG OID 
ProductFis family transcriptional regulator 
Protein accessionYP_351311 
Protein GI77461804 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.468143 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCACTC AAGTGCCGCA GCCACTGCTC TATGCCGAAG CCTTGCTGGC GCAGTTCGCC 
AGCCTGTCGC GCGCGGCGGA CGGTGCTGCG CTGCTGGGTG ACTTCGTGCG CGGTCTGGCC
GGGCTGAGCG GTTGCGAACT GACGCAGCTG TACTTGCTGG ACGCCACGCA CACGTCGCTG
GGAATGAACG CCGAATGCCT CGACGGTGTG CTGCAACCGC GCAGCGCGGC GAGCCTGCCG
GCGGACTACA ACGGCGAGCA ACTGTTGCAG TTCGCCCTGT GCCAGAACCG CGTGGTGAGC
TTCGACGACC TGGGCGGCAG CCTGCACGAA ACCAGTTTTC TGCCGGCGTC GTCCACGCCG
TGGCAGTCGC TGTTGTGCGT GCCGCTGGTC AATCAGCAGA AGGCCGTCGA AGGCCTTCTG
CTGTGCGCAA GCCGTCGCCA CATCGACCTG CAAGGCTTCG CCGATTCCCT CGGCCAGCTC
GGCTCGTTCG TGCTTGGTCA GCTGCATCTG CTGCAGCGTC TGCGCCAGCC AGTGGATGCG
GCCGCGCCGG TCGTGCGCAG CCTGCCGAGT GCCAGTGGCT ATGGCCTGAT CGGCAAGAGC
GCGGCGATGC GCCAGACCTA CTCGCTGATC AGCAAAGTCC TGCACAGCCC GTACACCGTG
CTGTTGCGTG GCGAGACCGG CACCGGCAAG GAAGTGGTCG CGCGGGCGAT CCACGATTGC
GGCCCGCGCC GGTCCCAGGC GTTCATCGTG CAGAACTGCG CGGCGTTCCC GGAAAACCTG
CTGGAAAGCG AGCTGTTCGG CTACCGCAAA GGTGCGTTCA CCGGCGCCGA TCGCGACCGC
GCCGGGCTGT TCGACGCGGC CAACGGCGGC ACTCTGTTGC TCGATGAAAT CGGCGACATG
CCGCTGTCGC TGCAAGCCAA ATTGCTGCGT GTATTGCAGG AAGGCGAGAT CCGTCCGCTG
GGTTCCAACG ACACCCACAA GATCGACGTG CGAATTATCG CTGCGACGCA CCGCGATCTG
TCGGTGCTGG TCAGCGAAGG CAAATTCCGT GAGGACCTGT ACTACCGCCT CGCGCAATTT
CCGATCGAGT TGCCGGCCCT GCGTCAGCGT GAAGGCGACA TCCTCGACCT CGCCAAACAC
TTCGCCGACA AGGCCTGCAC TTTCCTGCAA CGTGATCCGG TGCGCTGGTC GGACGCAGCG
CTGGAACACC TGTCCGGTTA CACCTTCCCC GGCAACGTGC GTGAACTCAA AGGTCTGGTC
GAACGCGCGG TGCTGTTGTG CGAGGGCGGC GAGTTGCTGG CCGAACATTT CTCGCTGCGC
CTGGAATCGG CGCCAGCGCC GGAAGACCAC TGCGGCCTCA ATCTGCGCGA ACGACTGGAA
GCGGTCGAAC GCAATCTGTT GCTCGATTGC CTGCGCAAGA ACGACGGCAA CCAGACGCTC
GCCGCCCGGG AACTGGGCTT GCCGCGCCGC ACGCTGCTGT ACCGGCTCGG CCGCTTGAAC
ATCAATCTGG GTGATTTCGA TGGGTAG
 
Protein sequence
MFTQVPQPLL YAEALLAQFA SLSRAADGAA LLGDFVRGLA GLSGCELTQL YLLDATHTSL 
GMNAECLDGV LQPRSAASLP ADYNGEQLLQ FALCQNRVVS FDDLGGSLHE TSFLPASSTP
WQSLLCVPLV NQQKAVEGLL LCASRRHIDL QGFADSLGQL GSFVLGQLHL LQRLRQPVDA
AAPVVRSLPS ASGYGLIGKS AAMRQTYSLI SKVLHSPYTV LLRGETGTGK EVVARAIHDC
GPRRSQAFIV QNCAAFPENL LESELFGYRK GAFTGADRDR AGLFDAANGG TLLLDEIGDM
PLSLQAKLLR VLQEGEIRPL GSNDTHKIDV RIIAATHRDL SVLVSEGKFR EDLYYRLAQF
PIELPALRQR EGDILDLAKH FADKACTFLQ RDPVRWSDAA LEHLSGYTFP GNVRELKGLV
ERAVLLCEGG ELLAEHFSLR LESAPAPEDH CGLNLRERLE AVERNLLLDC LRKNDGNQTL
AARELGLPRR TLLYRLGRLN INLGDFDG