Gene Pfl01_5579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5579 
Symbol 
ID3713495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6250779 
End bp6252110 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content62% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_351307 
Protein GI77461800 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACCC ATAAAGTCAT CTGGCAGGAA GGCATGCTGC TGCGCCCGCA GCACTTCCAG 
CACAACGACC GCTACTACGA TCACCAGATG AAGACCCGCA CCCAGTTGCT GGGCGGCTAC
ACCTGGGGTT TCCTGAATCT GGAGATCGAC CTGCAGTTCC TCAACATGGG CAAACTGGTG
ATCAGTGAAG CCTCGGGGAT CCTGCCGGAC GGCAGCCTGT TCGAACTCGG TGGCAACACC
GAGCCGCTGG CGCTGGACGT ACCGCCGAAC ACCGGCAACA TGCCGATCTA CCTGGCGCTG
CCGCTGGTCA CCGGTAACCA CATCGAGGCC CGGCGCCCGG AGCAGTCCGA TGTGCTGGCG
CGCTACACCG CATATGACGC CGAAGTCGCC GACTCCAACG CCGGTGATGA TTCCGCCAGC
CAGGTCAGTT GCGGCCGCCC GGACTTCAAG CTGTTGCTCG GCGAGCAGCA GAGTGACCAG
GCTTACGTGA AGCTGAAGAT CTGCGATGTG CTCGACACCA CGCCGGACGG CGTGATCAGC
CTCGATCCGG ATTTCGTGCC GACCTACATT CAGGCCCACG CCTCCAGCTA CCTGCTGTCG
TGCCTGAAAG AAGTGATCAG CATGCTCGGC CACCGGGGCG ACACCATTGC CGAGCGCATT
CGTTCGAACG GCAAGGTCGG CGGCGCGGAA ATCGGCGACT TCATGATGCT GCAACTGATA
AACCGCACCG AACTGCTGCT GCGCCACTAC CTGGGCCTGG AGCAGGTTCA CCCGGAAGAG
TTGTATCGTA CGCTGCTGAC CATGCTCGGC GATCTGGCGA CGTTCTCCAG CGACAGCAAA
CGCCCGCGTC TGGACAGCCG CTACTCCCAC GCCGATCAGG GCGCGAGCTT CCGCAAACTG
ATGGAGTCGA TCCGTCAGGT GCTGTCGATG GTGCTGGAAC AGCACGCCAT CGAACTGATC
CTGCAAGCGC GTCAGTACGG GATCATCGTG TCGCCGCTGC ACGACCACAA ACTGCTGGGC
TCGGCGTCGT TCGTGCTGGC AGCCAGTGCC AACTGCGACT CCGAAGAACT GCGCAACCGC
TTGCCTGCGC ACCTCAAGGT CGGCCCGGTG GAGCGCATCC GCCAACTGGT CAACCTGCAC
CTGCCGGGGA TCAAGGTCAA ACCGTTGCCG GTGGCCCCGC GGCAGATCGC GTTCCACTCC
AACAAAACCT ATTTCATCCT CGAACTCAGT TCCGAAGACC TGGCACAACT CGAGCGCTCC
GGCGGCTTCG CGTTCCATGT GTCCGGCGAA TTCGCCGAGC TTGAACTGAA ATTCTGGGCC
ATCAGGAACT GA
 
Protein sequence
MNTHKVIWQE GMLLRPQHFQ HNDRYYDHQM KTRTQLLGGY TWGFLNLEID LQFLNMGKLV 
ISEASGILPD GSLFELGGNT EPLALDVPPN TGNMPIYLAL PLVTGNHIEA RRPEQSDVLA
RYTAYDAEVA DSNAGDDSAS QVSCGRPDFK LLLGEQQSDQ AYVKLKICDV LDTTPDGVIS
LDPDFVPTYI QAHASSYLLS CLKEVISMLG HRGDTIAERI RSNGKVGGAE IGDFMMLQLI
NRTELLLRHY LGLEQVHPEE LYRTLLTMLG DLATFSSDSK RPRLDSRYSH ADQGASFRKL
MESIRQVLSM VLEQHAIELI LQARQYGIIV SPLHDHKLLG SASFVLAASA NCDSEELRNR
LPAHLKVGPV ERIRQLVNLH LPGIKVKPLP VAPRQIAFHS NKTYFILELS SEDLAQLERS
GGFAFHVSGE FAELELKFWA IRN