Gene Pfl01_5542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5542 
Symbol 
ID3713108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6211099 
End bp6212496 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content62% 
IMG OID 
Productphosphomannomutase 
Protein accessionYP_351270 
Protein GI77461763 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.715564 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCC CCGCCCAAGT CGCCCCGAAG CTTCCTGACA GCATCTTCCG CGCCTACGAC 
ATTCGCGGCA CCGTGCCGGA ATTCCTCAAT GCCGAAACCG CCTACTGGAT CGGCCGCGCC
ATCGGCTCCC AAAGCCTGGC CCAAGGCGAA CCGAACGTGT CCGTCGGTCG TGACGGCCGC
CTGTCCGGTC CGGAACTGGT TGCCGCACTG ATCCGCGGCA TCGCCGAGAG CGGCTGCCAC
GTCAGCGACG TCGGCCTGGT GCCGACCCCG GCGCTGTACT ACGCCGCCAA CGTGCTGGCC
GGCAAATCCG GCGTAATGCT CACTGGCAGC CATAACCCGT CGAACTACAA CGGCTTCAAG
ATCGTGATCG CCGGCGATAC CCTCGCCAAC GAACAGATCC AGGCCCTGCA CGAGCGCCTC
AAGACCGGCA ACCTGAGCAG CGGCACCGGC AGCGTGACCC AGGTCGAAAT CCTCGACCGC
TACAACACCG AAATCGTCCA GGACATCAAA CTGGCCCGGC GCCTGAAAGT CGTGGTCGAC
TGCGGCAACG GCGCGGCCGG CGTGATCGCC CCGCAACTGA TCGAAGCGCT GAACTGCGAA
GTCATCCCGC TGTTCTGCGA TGTCGACGGC AACTTCCCGA ACCATCACCC GGACCCGGGC
AAGCCTGAGA ACCTCGTCGA CCTGATCGCC AAGGTCAAGG AAACCAACGC CGACATCGGC
CTGGCCTTCG ACGGCGACGG CGACCGCGTC GGCGTGGTGA CCAACACCGG CACCATCGTG
TTTCCGGACC GCCTGCTGAT GCTGTTCGCC CGTGACGTGG TGGCGCGCAA CCCGGACGCG
GAGATCATCT TCGACGTCAA ATGCACCCGT CGCCTGATCC CGCTGATCAA GGAATATGGC
GGTCGGCCGC TAATGTGGAA GACCGGTCAC TCGTTGATCA AAAAGAAAAT GAAACAATCC
GGCGCGCTGT TGGCCGGCGA AATGAGCGGG CACATTTTCT TCAAGGAACG CTGGTTCGGT
TTCGACGACG GCATTTACAG CGCCGCGCGG CTGCTGGAAA TCCTCAGCAA GGAAAAATCT
TCGGCCGAGG AGCTGTTCGC GACCTTCCCG AACGATATTT CCACGCCGGA AATCAATATC
CATGTGACCG AAGAGAGCAA ATTCAGCATC ATTGATGCAC TGCACGATGC GCAGTGGGGC
CCAGGCGCCG ACCTGACCAC CATTGACGGC GTGCGGGTCG ACTACGCCAA AGGCTGGGGC
CTGGTGCGCG CATCCAACAC CACACCGGTG CTGGTGCTGC GTTTCGAGGC CGATGACGAG
GCTGAACTGC AGCGCATCAA GGCTGTGTTC CATGCCCAAC TGAAACGCGT TGCACCTGAT
CTCCAACTAC CGTTCTGA
 
Protein sequence
MSTPAQVAPK LPDSIFRAYD IRGTVPEFLN AETAYWIGRA IGSQSLAQGE PNVSVGRDGR 
LSGPELVAAL IRGIAESGCH VSDVGLVPTP ALYYAANVLA GKSGVMLTGS HNPSNYNGFK
IVIAGDTLAN EQIQALHERL KTGNLSSGTG SVTQVEILDR YNTEIVQDIK LARRLKVVVD
CGNGAAGVIA PQLIEALNCE VIPLFCDVDG NFPNHHPDPG KPENLVDLIA KVKETNADIG
LAFDGDGDRV GVVTNTGTIV FPDRLLMLFA RDVVARNPDA EIIFDVKCTR RLIPLIKEYG
GRPLMWKTGH SLIKKKMKQS GALLAGEMSG HIFFKERWFG FDDGIYSAAR LLEILSKEKS
SAEELFATFP NDISTPEINI HVTEESKFSI IDALHDAQWG PGADLTTIDG VRVDYAKGWG
LVRASNTTPV LVLRFEADDE AELQRIKAVF HAQLKRVAPD LQLPF