| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5539 |
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| Symbol | radC |
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| ID | 3713629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 6208379 |
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| End bp | 6209053 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | DNA repair protein RadC |
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| Protein accession | YP_351267 |
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| Protein GI | 77461760 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.856956 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTATTC GCGATTGGCC GGCGGCGGAA AGGCCGCGGG AAAGGTTGTT GGAACAGGGC
TCTGCGAGCC TTTCGGATGC GGAACTGCTG GCGATTTTTC TGCGAACCGG CGTGCCGGGG
AAAAGTGCAG TTGATCTGGC GCGGCACTTG TTGAATCAGT TTGGCAGCTT GAGATTGTTG
CTTGAGGCCG ATCAGGAAGC ATTCAGCAAG CAATTGGGTC TCGGCCCTGC AAAGTTCGCC
CAGCTGCAAG CTGCTCAAGA AATGAGCAAG CGACATCTGG CCGAGCGTTC ACGGCAAAAA
ACAGCGCTTG AAAACCCACA AGTGGTTCGT GATTACCTCA AAGTCATGCT GCGCCACGAG
CCGCACGAGG TATTTGGTTG CTTGTTTCTG GATTCCAAGC ATCAAGTGCT CACCTTCGAG
GCTCTGTTTC GCGGCTCGAT CGACAACACC GCCGTGCATC CCCGGGAAGT CGTGAAGCGT
TCCCTGGCCA ACAACGCGGC AGCGGTGATC CTGTGTCATA ACCATCCGTC GGGAAACAGC
GATCCGAGTC AGGCTGATCG ATTATTGACC AAGCGCTTGC AGAAGGCTTT GGAGCTGATC
GATGTGCGGG TGCTCGACCA CTTCATCGTT GGCGATGGGG AACCGTTATC GATGGCGGAG
TGTGGCTGGA TGTAG
|
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| Protein sequence | MSIRDWPAAE RPRERLLEQG SASLSDAELL AIFLRTGVPG KSAVDLARHL LNQFGSLRLL
LEADQEAFSK QLGLGPAKFA QLQAAQEMSK RHLAERSRQK TALENPQVVR DYLKVMLRHE
PHEVFGCLFL DSKHQVLTFE ALFRGSIDNT AVHPREVVKR SLANNAAAVI LCHNHPSGNS
DPSQADRLLT KRLQKALELI DVRVLDHFIV GDGEPLSMAE CGWM
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