Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5538 |
Symbol | |
ID | 3713628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 6206756 |
End bp | 6208342 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | extracellular solute-binding protein |
Protein accession | YP_351266 |
Protein GI | 77461759 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.332617 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.703361 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCTCG CTGCCCTCCC CCTGCTCTTC GCCCCGCTGT TACTGAGTCC ACTGGCCCAG GCCGCCGCCC TGAGCGTCTG CACCGAGGCC AGTCCCGAAG GCTTCGACGT GGTGCAGTAC AACTCGTTGA CCACCACCAA CGCCTCGGCG GACGTGCTGA TGAACCGTCT GGTGGATTTC GACACCGCCA GCGGCAAGGT CGTCCCGAGC CTGGCCGACA GCTGGGAAGT CAGCACCGAT GGCCTGAGCT ATGTGTTCAA ACTGCACCCG CAGGTGAAGT TTCACACCAC CGACTACTTC AAGCCGACCC GTGAACTGAC CGCCGAAGAC GTCAAATTCA GTTTCGACCG CATGCTCGAC CCGGCCAACC CGTGGCACAA GGTCGCCCAG AGCGGCTTCC CCCACGCCCA GTCGATGCAG TTGCCGAGCC TGATCAAGAA GATCGACGCG CTGGACCCGC TGACCGTGCG CTTCACCCTC GACCACCCGG ACTCGACATT CCTCGCGACC CTGAGCATGG GATTCGCCTC CATTTATTCT GCTGAATACG CCGACAAGCT GCTGAAGGCT GGCGCGACCG ATAAGCTCAA CAGCCAACCG GTCGGCACTG GCCCGTTCGT GTTCACCCGC TTCCAGAAAG ACGCCTCGAT CCGCTACAAG GCCAACCCGG ACTACGTCCG TGGCAAGCCT GCGGTGGACC CGCTGATTTT CGCCATCACT CCGGACGCCA ACGTGCGCCT GCAAAAGCTG CGGCGCAACG AGTGCCAGAT TGCCTTGTCG CCAAAACCGC TGGACGTACA GGCCGCGAAG CAGGAGCCGA CGCTGAAAGT CGAAAAGACT GACGCGTTCA TGACCGCCTT CGTCGGCATC AACAGCCAGC ATCCGCCGCT GGACAAACCG GAAGTGCGCC AGGCGATCAA CCTCGCCTTC GACAAGGCCA ACTACCTCAA GGCTGTATTC GAAGACACCG CCGAAGCCGC CAACGGTCCG TATCCGCCGA ATACCTGGAG CTACGCGAAA AACCTGCCGG GTTACGCCCA CGACGTGGAC AAGGCCAAGG CACTGCTCGC CAAGGCTGGA TTGAAGGACG GTTTCCAGAC CACCATCTGG ACGCGCCCGT CAGGCAGCCT GCTCAATCCG AATCCGAGCC TCGGCGCACA ACTGCTGCAA TCGGATCTGG CAGAAATCGG CATTCAGGCG GAAATCCGCG TGATCGAATG GGGCGAACTG ATCCGTCGCG CCAAGGCTGG CGAACATGAC CTGCTGTTCA TGGGCTGGGC CGGCGACAAC GGCGACCCGG ACAACTTCCT CACCCCGCAG TTTTCCTGCG CGGCGGTCAA ATCCGGCACC AACTTCGCCC GCTATTGCAA TGCCGACCTG GACAAGCTGA TCAGCGCCGG CAAGACCACC AGCGAACAAG GTGTGCGCAC CAAACTCTAC GAACAGGCAC AGGCGCAGAT TCAGCAACAG GCACTGTGGC TGCCGCTGGC GCATCCGACT GCGTATGCGC TGACGCGTAA AGACGTGCAG GGTTACTCGG TGAGCCCGTT CGGGCGGCAG GACTACTCCA AGGTCACCCT CAAGTAA
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Protein sequence | MRLAALPLLF APLLLSPLAQ AAALSVCTEA SPEGFDVVQY NSLTTTNASA DVLMNRLVDF DTASGKVVPS LADSWEVSTD GLSYVFKLHP QVKFHTTDYF KPTRELTAED VKFSFDRMLD PANPWHKVAQ SGFPHAQSMQ LPSLIKKIDA LDPLTVRFTL DHPDSTFLAT LSMGFASIYS AEYADKLLKA GATDKLNSQP VGTGPFVFTR FQKDASIRYK ANPDYVRGKP AVDPLIFAIT PDANVRLQKL RRNECQIALS PKPLDVQAAK QEPTLKVEKT DAFMTAFVGI NSQHPPLDKP EVRQAINLAF DKANYLKAVF EDTAEAANGP YPPNTWSYAK NLPGYAHDVD KAKALLAKAG LKDGFQTTIW TRPSGSLLNP NPSLGAQLLQ SDLAEIGIQA EIRVIEWGEL IRRAKAGEHD LLFMGWAGDN GDPDNFLTPQ FSCAAVKSGT NFARYCNADL DKLISAGKTT SEQGVRTKLY EQAQAQIQQQ ALWLPLAHPT AYALTRKDVQ GYSVSPFGRQ DYSKVTLK
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