Gene Pfl01_5512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5512 
Symbol 
ID3713778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6177296 
End bp6179611 
Gene Length2316 bp 
Protein Length771 aa 
Translation table11 
GC content63% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_351240 
Protein GI77461733 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.807443 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTGC ATTTCTCTAC CAAGGCCGGG ACGCTGTCCA GCCTGCAAGG ACGGCTCACC 
TCGGCCTGCA TTGCTCCGCT ATTGGCATTC ACAGTGGCGG ACTGGCGGCG GGACCGGCAA
GCCTGTGTCC AGGCGATCCG GGAACGACTG CCGGCCGCCC CGTGGATCGT GCGCTCCAGT
TGCGGGCGCG AGGACAGTGC CCAAGCGTCC TTAGCGGGCG CCTTCCTGTC GATCCCGAAT
GTCGACGATG CAGGGCTGAG CCCGGCGGTG GAACAGGTCA TCGCCAGTTA TGGCGAGGCG
TGTCCGGCGG ATGAAATACT GATCCAGCCC ATGCTGGAGA ATGTGCTGCG ATCCGGCGTG
GCGTTTTCCC ATGACCCCAA CACCTGCGCG CCCTATCGCG TGGTTAACTG GTCGGAAGGC
AACGACACGG CCTCGGTGAC CGGTGGCATG GGCGGTCGGC TCTGGCAGCA GGCTGCCCAG
AGCAAGGTTG CAGCGCCCGC CGCCCTCGCG CCCGTGGTTG GCCTGCTCGA AGAGCTGCTG
GCACTGTTCG GTGGCGAGCC CGTCGACTGT GAGTTTGCCG TCACACGGGA AGCCGAAGGC
GAAGTGCTCT GGCTGTTGCA GGCCCGACCC CTGATCCTGC CTTCCCGTCC AGAGACCGAT
GCCGAGCAAT CGGCCCGGCT GGACAGCATT CAGCGCAAAG TGGCGCGCGG CATGCGACCG
CATCCGTTCC TGATCGGACA GCGCACCGTC TATGGCGTGA TGCCTGACTG GAACCCGGCG
GAAATCATCG GTATCCGGCC CAAACCGTTG GCGCTCTCGT TGTACCGGGA CCTGGTGACC
GATTCCATCT GGGCTTACCA GCGGCACAAC TACGGCTACC GCAACCTGCG CAGCTTTCCG
CTGATGCCGC ACTTTTTCGG CCTGCCTTAT ATCGATGTGC GCCTGTCGTT CAACTCGTTC
ATTCCGGCGG ACCTCGATGA GGATCTGGCG GGACGACTGG TCGACTATTA CATCGACCGG
TTGCTGGCCG AACCGACACT CCACGACAAG GTGGAGTTCG AGATCGTGTT CTCGTGCTAC
ACCCTGGACC TCTCGCAGCA GCTGGAACGC CTCGCCGATG CAGGCTTTCA GCCCCACGAG
CTGGAAGCGA TCAGCACCAG CCTGCGCCAG CTGACCAACC GCATCGTCCA TCCCAAGGAC
GGTCTGTGGC GCAGCGATGC CAACAAGCTG GATGTGCTCA ATGCACGTCG TGAGGAGCTG
CTGGCTTCCG ATGCCGATCC GCTGGAGCGC ATTTACTGGC TGCTGGAAGA TGCGAAACGC
TATGGCACCC TGCCCTTCGC CGGTCTGGCC CGTGCGGGTT TCGTCGCCGT GCAGATGCTC
AGGTCGCTGG TGTCCGTGGG CGTGTTCTCT CAGGCCGACT ACGATGCGTT CATGGCCGGT
GTTTCAACCG TCAGCGGGCA GCTGGCGCGC GACCGGGCGA CGCTCGGCAA GTCAGAATTC
CTTGCGCGTT ACGGCCATTT GCGACCGGGC ACCTACGACA TTCTGTCTCC CCGTTACGAT
GAAGCACCGG AACTCTATTT CGACTGGACA CAGCGTCCCT CCGCCCCGGA ACCCCTTCAG
CCGTTTTCGC TGACGCTGCC GCAGATGCGC GAGATCGTGA AGCTGCTGGA AGCCCATGGT
TTGCAGCCTG ATCCAGTGGG TTTGCTGGAC TTCCTGCAGA ACGGTATCGA ACTGCGGGAG
CTGGCCAAGT TTCACTTCAC CCGCAATCTC TCCGATGCCC TTGCCCTGAT TGCACAAGTC
GGTGCCGAGC ACGGCATCGA TCGCGAAGAC CTGGCTTACT GCGACATCCG CGCCTTCACC
GAACTGCACG TGGCGGCGGC GGATCCGAAA GAGGTGCTGC TGCGCAGCAT CGAACAGGGC
AAGGCGCGTT ATGCCGAGAC GCTCAAGGTC TCCCTGCCGC CGGTGATCAC CCGCCCGGAA
GATGTCTGGA GCTTCGAGTG GCCGGAAACG GCGCCCAATT TCATCACCCA GAAACGCGTG
ACCGCGCCGG TTGTGCTGTG CGATGACCGG GACAAACTCG CCGGGGCGAT CGTCTGCATT
CCCAATGCCG ATCCGGGGTT CGACTGGCTG TTCGCCTACC CGATTGCCGG ATTGATCACC
GCCTGGGGCG GCGCCAACTC GCACATGGCG ATTCGTGCGG GCGAACTGGG CTTGCCGGCC
GTCATTGGTG CGGGTGAAGT GCTTTACCGG CGCTGGTCGA CCGCGGACTT CCTGCACCTG
GATTGCCCGG GCCGCCGGGT GGAGATGATG ACATGA
 
Protein sequence
MALHFSTKAG TLSSLQGRLT SACIAPLLAF TVADWRRDRQ ACVQAIRERL PAAPWIVRSS 
CGREDSAQAS LAGAFLSIPN VDDAGLSPAV EQVIASYGEA CPADEILIQP MLENVLRSGV
AFSHDPNTCA PYRVVNWSEG NDTASVTGGM GGRLWQQAAQ SKVAAPAALA PVVGLLEELL
ALFGGEPVDC EFAVTREAEG EVLWLLQARP LILPSRPETD AEQSARLDSI QRKVARGMRP
HPFLIGQRTV YGVMPDWNPA EIIGIRPKPL ALSLYRDLVT DSIWAYQRHN YGYRNLRSFP
LMPHFFGLPY IDVRLSFNSF IPADLDEDLA GRLVDYYIDR LLAEPTLHDK VEFEIVFSCY
TLDLSQQLER LADAGFQPHE LEAISTSLRQ LTNRIVHPKD GLWRSDANKL DVLNARREEL
LASDADPLER IYWLLEDAKR YGTLPFAGLA RAGFVAVQML RSLVSVGVFS QADYDAFMAG
VSTVSGQLAR DRATLGKSEF LARYGHLRPG TYDILSPRYD EAPELYFDWT QRPSAPEPLQ
PFSLTLPQMR EIVKLLEAHG LQPDPVGLLD FLQNGIELRE LAKFHFTRNL SDALALIAQV
GAEHGIDRED LAYCDIRAFT ELHVAAADPK EVLLRSIEQG KARYAETLKV SLPPVITRPE
DVWSFEWPET APNFITQKRV TAPVVLCDDR DKLAGAIVCI PNADPGFDWL FAYPIAGLIT
AWGGANSHMA IRAGELGLPA VIGAGEVLYR RWSTADFLHL DCPGRRVEMM T