Gene Pfl01_5505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5505 
Symbol 
ID3713771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6170031 
End bp6171368 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content63% 
IMG OID 
Productammonium transporter 
Protein accessionYP_351233 
Protein GI77461726 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.698175 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCTGC GTAAATTCGC AGGGCTAGGA GCCCTGTTGT CTATCGTAAT GCCCGGCCTG 
GCCATGGCGG CAGACGAAGT GGCAGCTCCA GTCCTGAACT CCGGCGACAC CGCCTGGATG
CTCACCTCCA CAGCCCTCGT GCTGTTCATG ACCATTCCCG GCCTCGCGCT GTTCTACGGC
GGCATGGTCC GGTCGAAAAA CATTCTTTCC GTGATGATGC AGTGCTTTGC CATTACCGGT
CTGATCAGCG TCCTGTGGGT CATTTATGGC TACAGCATCG CGTTCGACAC CACCGGCATG
GAGCAGGGCG TCGTCAACTT CAATTCGTTC GTGGGCGGTT TCGGCAAGGC GTTCCTGGCC
GGTGTCACGC CAGCGAGCCT GACCGGCCCG GCGGCGCTGT TCCCCGAGGC GGTCTTCATC
ACCTTCCAGA TGACCTTCGC GATCATCACC CCGGCGCTGA TCGTCGGTGC ATTCGCCGAG
CGGATGAAGT TCTCCGCGAT GCTGATCTTC ATGGGCATCT GGTTCACCCT GGTTTATGCA
CCGATCGCGC ACATGGTCTG GTCCGGCAAC GGCGGCCTGA TGTGGGACTG GGGCGTACTC
GACTTCGCGG GCGGCACCGT GGTGCACATC AACGCCGGTG TGGCCGGTCT GATTGCCTGC
CTGGTACTGG GTAAACGCAA AGGCTTCCCG ACCACGCCGA TGGCGCCACA CAATCTGGGT
TACACCCTGA TGGGCGCGGC GATGCTGTGG GTCGGCTGGT TCGGCTTCAA CGCCGGTTCC
GCTGCGGCCG CCAACGGCAC CGCCGGCATG GCGATGCTGG TGACCCAGAT CGCGACCGCC
GCTGCTGCAC TGGGCTGGAT GTTCGCCGAG TGGATCACCC ACGGCAAACC TAGCGCACTG
GGTATCGCAT CCGGCGTCGT TGCAGGTCTG GTGGCGATCA CTCCGGCCGC TGGCACCGTG
GGCCCGATGG GTGCCCTGGT CATCGGTCTG GCGGCAGGCG TGGTGTGCTT CTTCTGCGCC
ACCACCCTGA AACGCAAACT CGGTTATGAC GACTCCCTGG ACGCCTTCGG CGTGCACGGT
ATCGGCGGTA TCCTCGGCGC GATCCTGACC GGTGTGTTCG CCGCACCGTC GCTGGGTGGC
TTCGGCACCG TCACCGACAT CGCCGCACAA GTCTGGATTC AGTGCAAAGG CGTCGGCTTC
ACCGTGATCT ATACCGCGAT CGTCACCTTC ATCATCCTCA AGGTGCTGGA TGCCGTGATG
GGTCTGCGCG TGACCGAGGA AGAAGAATCG GTCGGCCTGG ATCTGGCACA ACACAACGAG
CGTGGCTACA ACCTGTAA
 
Protein sequence
MTLRKFAGLG ALLSIVMPGL AMAADEVAAP VLNSGDTAWM LTSTALVLFM TIPGLALFYG 
GMVRSKNILS VMMQCFAITG LISVLWVIYG YSIAFDTTGM EQGVVNFNSF VGGFGKAFLA
GVTPASLTGP AALFPEAVFI TFQMTFAIIT PALIVGAFAE RMKFSAMLIF MGIWFTLVYA
PIAHMVWSGN GGLMWDWGVL DFAGGTVVHI NAGVAGLIAC LVLGKRKGFP TTPMAPHNLG
YTLMGAAMLW VGWFGFNAGS AAAANGTAGM AMLVTQIATA AAALGWMFAE WITHGKPSAL
GIASGVVAGL VAITPAAGTV GPMGALVIGL AAGVVCFFCA TTLKRKLGYD DSLDAFGVHG
IGGILGAILT GVFAAPSLGG FGTVTDIAAQ VWIQCKGVGF TVIYTAIVTF IILKVLDAVM
GLRVTEEEES VGLDLAQHNE RGYNL