Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5505 |
Symbol | |
ID | 3713771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 6170031 |
End bp | 6171368 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | ammonium transporter |
Protein accession | YP_351233 |
Protein GI | 77461726 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.698175 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCTGC GTAAATTCGC AGGGCTAGGA GCCCTGTTGT CTATCGTAAT GCCCGGCCTG GCCATGGCGG CAGACGAAGT GGCAGCTCCA GTCCTGAACT CCGGCGACAC CGCCTGGATG CTCACCTCCA CAGCCCTCGT GCTGTTCATG ACCATTCCCG GCCTCGCGCT GTTCTACGGC GGCATGGTCC GGTCGAAAAA CATTCTTTCC GTGATGATGC AGTGCTTTGC CATTACCGGT CTGATCAGCG TCCTGTGGGT CATTTATGGC TACAGCATCG CGTTCGACAC CACCGGCATG GAGCAGGGCG TCGTCAACTT CAATTCGTTC GTGGGCGGTT TCGGCAAGGC GTTCCTGGCC GGTGTCACGC CAGCGAGCCT GACCGGCCCG GCGGCGCTGT TCCCCGAGGC GGTCTTCATC ACCTTCCAGA TGACCTTCGC GATCATCACC CCGGCGCTGA TCGTCGGTGC ATTCGCCGAG CGGATGAAGT TCTCCGCGAT GCTGATCTTC ATGGGCATCT GGTTCACCCT GGTTTATGCA CCGATCGCGC ACATGGTCTG GTCCGGCAAC GGCGGCCTGA TGTGGGACTG GGGCGTACTC GACTTCGCGG GCGGCACCGT GGTGCACATC AACGCCGGTG TGGCCGGTCT GATTGCCTGC CTGGTACTGG GTAAACGCAA AGGCTTCCCG ACCACGCCGA TGGCGCCACA CAATCTGGGT TACACCCTGA TGGGCGCGGC GATGCTGTGG GTCGGCTGGT TCGGCTTCAA CGCCGGTTCC GCTGCGGCCG CCAACGGCAC CGCCGGCATG GCGATGCTGG TGACCCAGAT CGCGACCGCC GCTGCTGCAC TGGGCTGGAT GTTCGCCGAG TGGATCACCC ACGGCAAACC TAGCGCACTG GGTATCGCAT CCGGCGTCGT TGCAGGTCTG GTGGCGATCA CTCCGGCCGC TGGCACCGTG GGCCCGATGG GTGCCCTGGT CATCGGTCTG GCGGCAGGCG TGGTGTGCTT CTTCTGCGCC ACCACCCTGA AACGCAAACT CGGTTATGAC GACTCCCTGG ACGCCTTCGG CGTGCACGGT ATCGGCGGTA TCCTCGGCGC GATCCTGACC GGTGTGTTCG CCGCACCGTC GCTGGGTGGC TTCGGCACCG TCACCGACAT CGCCGCACAA GTCTGGATTC AGTGCAAAGG CGTCGGCTTC ACCGTGATCT ATACCGCGAT CGTCACCTTC ATCATCCTCA AGGTGCTGGA TGCCGTGATG GGTCTGCGCG TGACCGAGGA AGAAGAATCG GTCGGCCTGG ATCTGGCACA ACACAACGAG CGTGGCTACA ACCTGTAA
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Protein sequence | MTLRKFAGLG ALLSIVMPGL AMAADEVAAP VLNSGDTAWM LTSTALVLFM TIPGLALFYG GMVRSKNILS VMMQCFAITG LISVLWVIYG YSIAFDTTGM EQGVVNFNSF VGGFGKAFLA GVTPASLTGP AALFPEAVFI TFQMTFAIIT PALIVGAFAE RMKFSAMLIF MGIWFTLVYA PIAHMVWSGN GGLMWDWGVL DFAGGTVVHI NAGVAGLIAC LVLGKRKGFP TTPMAPHNLG YTLMGAAMLW VGWFGFNAGS AAAANGTAGM AMLVTQIATA AAALGWMFAE WITHGKPSAL GIASGVVAGL VAITPAAGTV GPMGALVIGL AAGVVCFFCA TTLKRKLGYD DSLDAFGVHG IGGILGAILT GVFAAPSLGG FGTVTDIAAQ VWIQCKGVGF TVIYTAIVTF IILKVLDAVM GLRVTEEEES VGLDLAQHNE RGYNL
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