| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5499 |
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| Symbol | dapF |
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| ID | 3713823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 6165723 |
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| End bp | 6166553 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_351227 |
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| Protein GI | 77461720 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCTGC GTTTTACCAA GATGCATGGC CTGGGCAACG ACTTCATGGT TCTCGACCTG
GTCAGTCAGC ACGCGCATAT TCAGCCCAAG CACGCGAAAA TGTGGGGCGA CCGGCACACC
GGCATCGGTT TCGACCAGTT GCTGATCGTC GAGGCGCCAA GCAATCCGGA CGTGGATTTC
CGTTACCGGA TCTTCAACTC CGACGGCTCC GAAGTGGAGC AGTGCGGCAA CGGTGCACGC
TGCTTCGCCC GCTTCGTGCT TGATAAACGC CTGACCGCCA AACGGCAGAT CCGCGTCGAG
ACCAAGGGCG GCATCATTGA GCTGGACGTG CGTAACGACG GCCAGATCGG CGTGAACATG
GGCGCCCCGC GCCTGGTGCC GGCGGACATC CCGTTCCAGG CGCCGGAGCA GGCCCTGAGT
TATCAGGTCG ATGTCGACGG TACGCCGGTC GATCTGGCGG CGGTGTCCAT GGGCAACCCC
CATGCGGTGC TGCGGGTCAG CGATATCAAC ACTGCACCGG TGCATGAACT GGGGCCGAAA
ATCGAACACC ATCCGCGCTT CCCGGCGCGG GTCAACGTCG GTTTTCTCCA GGTCATCGAC
CGCCATCGCG CGCAACTGCG CGTGTGGGAA CGCGGCGCCG GGGAAACCCA GGCCTGCGGC
ACCGGTGCCT GCGCTGCTGC TGTAGCGGCG ATCAGTCAGG GGTGGATGGA TTCGCCACTG
TTGATCGACC TGCCGGGCGG GCGTTTGTCC ATAGAGTGGG CAGGCCCCGG CCAACCGGTG
TTGATGACCG GCCCGGCAGT GCGCGTATAC GAAGGACAAG TGCGTCTTTG A
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| Protein sequence | MLLRFTKMHG LGNDFMVLDL VSQHAHIQPK HAKMWGDRHT GIGFDQLLIV EAPSNPDVDF
RYRIFNSDGS EVEQCGNGAR CFARFVLDKR LTAKRQIRVE TKGGIIELDV RNDGQIGVNM
GAPRLVPADI PFQAPEQALS YQVDVDGTPV DLAAVSMGNP HAVLRVSDIN TAPVHELGPK
IEHHPRFPAR VNVGFLQVID RHRAQLRVWE RGAGETQACG TGACAAAVAA ISQGWMDSPL
LIDLPGGRLS IEWAGPGQPV LMTGPAVRVY EGQVRL
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