Gene Pfl01_5474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5474 
Symbol 
ID3713856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6142871 
End bp6143458 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content57% 
IMG OID 
Productputative lipoprotein 
Protein accessionYP_351202 
Protein GI77461695 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.756494 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGCAC GCTTTTCCTT CATCGCCGTC CTCGCCCTGC TGGCCAGCGG TTGCGCCAAC 
ACTTCGCCGA CCCTGGGCAG CAAGAACATC AGCTACGGCG ACACCAAGGC CGTTGAAACC
GTAACCAACG AGTTCGGTTC GACCGACCTG CAGATGATCG CCGAGTCGAT GACCCGTTCT
CTGGCCCAGT CCGGCATTCT GCAGGGTCGC CCTGTGGTCC AGGTTTACGA CGTCAAGAAC
AAGACCAGCG AATACATCGA CACTCGCGAA ATCACCACCA GCATCAAGAC CCAGCTGATG
AAGTCCGGCA CCGCCCGCTT CGCCAGCGAC AACACCGCGA TGCAGAGCCA GGTCGACCAG
CTCAAGCTGC AAAACCAGAG CGGCCTGTAC AAGAAGAGCA CCGTGGCCAA GACTGGCAAC
ATGATCGCCG CCAAATACCG TCTTGAAGGT TCGATCAGCT CGATCGTCAA GCGCAGCAGC
GACTACAAGG ACGTCTTCTA CAAATTCAGC CTGCAACTGA TCGACGTTGA AAGCGGTCTG
GCCGAGTGGA TGGACGAGAA AGAGATCCGC AAAACCACGG AGCGTTAA
 
Protein sequence
MFARFSFIAV LALLASGCAN TSPTLGSKNI SYGDTKAVET VTNEFGSTDL QMIAESMTRS 
LAQSGILQGR PVVQVYDVKN KTSEYIDTRE ITTSIKTQLM KSGTARFASD NTAMQSQVDQ
LKLQNQSGLY KKSTVAKTGN MIAAKYRLEG SISSIVKRSS DYKDVFYKFS LQLIDVESGL
AEWMDEKEIR KTTER