Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5472 |
Symbol | |
ID | 3713854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 6141050 |
End bp | 6142444 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_351200 |
Protein GI | 77461693 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.825955 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATTCC GCGCCCCCAC CCTGATCGCG CTCAGCGCTG TCACCCTGCT GTCCGGCTGT TCGGCGTTTC GCAACTACGA TTCCGAACTG GCCCAGACCA ACCAGCAACT GGCCACCGGC AACGTCGACG CCGCCCTGAC CCTGCTGGAA AAGAACAACA CCGGCCCGGA CAAGGACCTG CTCTATTACT TCGAGAAGGG TGAACTGCTG CGCGCCAAGG GCGATCTGTC CGGCAGTCAG AATGCCTGGA CCAGCGCCGA CCAGGTGGTG GGCAAGTGGG AAGATTCGGT CAAGCTCGAC ACCGACAAGT ACCTGGCCCA GTTCGGCAGT TTCCTGGTCA ACGACAAGGT GCGCCGCTAC GAAGGCTACG ACTACGAAAA AGTCATGCTG ACCACGCAGA TGGCCCTGAA CCTGCTGGCG GTCAACGACT TCGACGGCGC CCGCACCGCG ATCAAGAAGA CTCATGAACG CGAAGCGGTG ATCGCCGACC TGCGCGACAA GGAATACCTC AAGAGCGAAG AGGAAGCCGA GAAAGAAGGC ATCAAGACCG AATACAAGGA CTTGCAGGGC TACCCGGTCG CCAGCCTCGA CGCGCCGGAA GTGGTCGGCC TGAAGAACAG CTACCAGAGT GCGTTCAGCC ATTACCTGGC CGGTTTCGTC TATGAAGCCC TGGGCGAGAA AGACCTCGCT GCGCCGGGCT ACCGCAAGGC TGCCGAGTTG CGCCCGAACA CCCCGCTGCT GGAGCAGGCG CTGGTCAATC TCGACAAGCC GGTCAAGAGC GACGACAGCG ACATTCTGAT CGTGGTGCAA AGCGGTCTGG CGCCGGCCCG CGATTCGATC CGCGTGCCGT TGCCGCTGCC AATCTCCAAC AACGTAGTGA TTACTCCGCT GTCGTTCCCG ATCATCAAGC CTGACACCTC CACCGCGACG TTCGCGCAGA TCGGCGTCGA TGGCCAACAG GTCGACCTGA CCGCACTGAA CAGCACCACC GCCATGTCCC GTCGCGCCCT GCGCGATGAC ATGCCGGGGA TCATCCTGCG CACCACCGTG CGCGCGATCA CCAAAGGTGT GGCGCAGAAG AAGATCAACG AAACCAACCC GCTGGCGGGT CTGGCGGTGG GTATTTCTTC AGCTGTGCTC GAAGGTGCCG ATACCCGTAC GTGGCGTACC CTGCCGGACA CCACACAAGT GGTCCGTCTG CGCTTGAAGA AAGGTGAGCA CCAAGTCACT CTGCCGAGCG CCGTCGGTGG CTCTCAGGTC AAGATCACCG TCGACCAGCG TTATCAGGTG ATCACCTTGC GCGCCGTCGG CAATCAGGTG TTCGCTGCCG GCATCGCCGC CCACGTCACC CCGAGCGCTG GCGCCACCGC CGTGGCCAGC CTCAAACAAC CTTAA
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Protein sequence | MAFRAPTLIA LSAVTLLSGC SAFRNYDSEL AQTNQQLATG NVDAALTLLE KNNTGPDKDL LYYFEKGELL RAKGDLSGSQ NAWTSADQVV GKWEDSVKLD TDKYLAQFGS FLVNDKVRRY EGYDYEKVML TTQMALNLLA VNDFDGARTA IKKTHEREAV IADLRDKEYL KSEEEAEKEG IKTEYKDLQG YPVASLDAPE VVGLKNSYQS AFSHYLAGFV YEALGEKDLA APGYRKAAEL RPNTPLLEQA LVNLDKPVKS DDSDILIVVQ SGLAPARDSI RVPLPLPISN NVVITPLSFP IIKPDTSTAT FAQIGVDGQQ VDLTALNSTT AMSRRALRDD MPGIILRTTV RAITKGVAQK KINETNPLAG LAVGISSAVL EGADTRTWRT LPDTTQVVRL RLKKGEHQVT LPSAVGGSQV KITVDQRYQV ITLRAVGNQV FAAGIAAHVT PSAGATAVAS LKQP
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