Gene Pfl01_5472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5472 
Symbol 
ID3713854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6141050 
End bp6142444 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content62% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_351200 
Protein GI77461693 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.825955 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTCC GCGCCCCCAC CCTGATCGCG CTCAGCGCTG TCACCCTGCT GTCCGGCTGT 
TCGGCGTTTC GCAACTACGA TTCCGAACTG GCCCAGACCA ACCAGCAACT GGCCACCGGC
AACGTCGACG CCGCCCTGAC CCTGCTGGAA AAGAACAACA CCGGCCCGGA CAAGGACCTG
CTCTATTACT TCGAGAAGGG TGAACTGCTG CGCGCCAAGG GCGATCTGTC CGGCAGTCAG
AATGCCTGGA CCAGCGCCGA CCAGGTGGTG GGCAAGTGGG AAGATTCGGT CAAGCTCGAC
ACCGACAAGT ACCTGGCCCA GTTCGGCAGT TTCCTGGTCA ACGACAAGGT GCGCCGCTAC
GAAGGCTACG ACTACGAAAA AGTCATGCTG ACCACGCAGA TGGCCCTGAA CCTGCTGGCG
GTCAACGACT TCGACGGCGC CCGCACCGCG ATCAAGAAGA CTCATGAACG CGAAGCGGTG
ATCGCCGACC TGCGCGACAA GGAATACCTC AAGAGCGAAG AGGAAGCCGA GAAAGAAGGC
ATCAAGACCG AATACAAGGA CTTGCAGGGC TACCCGGTCG CCAGCCTCGA CGCGCCGGAA
GTGGTCGGCC TGAAGAACAG CTACCAGAGT GCGTTCAGCC ATTACCTGGC CGGTTTCGTC
TATGAAGCCC TGGGCGAGAA AGACCTCGCT GCGCCGGGCT ACCGCAAGGC TGCCGAGTTG
CGCCCGAACA CCCCGCTGCT GGAGCAGGCG CTGGTCAATC TCGACAAGCC GGTCAAGAGC
GACGACAGCG ACATTCTGAT CGTGGTGCAA AGCGGTCTGG CGCCGGCCCG CGATTCGATC
CGCGTGCCGT TGCCGCTGCC AATCTCCAAC AACGTAGTGA TTACTCCGCT GTCGTTCCCG
ATCATCAAGC CTGACACCTC CACCGCGACG TTCGCGCAGA TCGGCGTCGA TGGCCAACAG
GTCGACCTGA CCGCACTGAA CAGCACCACC GCCATGTCCC GTCGCGCCCT GCGCGATGAC
ATGCCGGGGA TCATCCTGCG CACCACCGTG CGCGCGATCA CCAAAGGTGT GGCGCAGAAG
AAGATCAACG AAACCAACCC GCTGGCGGGT CTGGCGGTGG GTATTTCTTC AGCTGTGCTC
GAAGGTGCCG ATACCCGTAC GTGGCGTACC CTGCCGGACA CCACACAAGT GGTCCGTCTG
CGCTTGAAGA AAGGTGAGCA CCAAGTCACT CTGCCGAGCG CCGTCGGTGG CTCTCAGGTC
AAGATCACCG TCGACCAGCG TTATCAGGTG ATCACCTTGC GCGCCGTCGG CAATCAGGTG
TTCGCTGCCG GCATCGCCGC CCACGTCACC CCGAGCGCTG GCGCCACCGC CGTGGCCAGC
CTCAAACAAC CTTAA
 
Protein sequence
MAFRAPTLIA LSAVTLLSGC SAFRNYDSEL AQTNQQLATG NVDAALTLLE KNNTGPDKDL 
LYYFEKGELL RAKGDLSGSQ NAWTSADQVV GKWEDSVKLD TDKYLAQFGS FLVNDKVRRY
EGYDYEKVML TTQMALNLLA VNDFDGARTA IKKTHEREAV IADLRDKEYL KSEEEAEKEG
IKTEYKDLQG YPVASLDAPE VVGLKNSYQS AFSHYLAGFV YEALGEKDLA APGYRKAAEL
RPNTPLLEQA LVNLDKPVKS DDSDILIVVQ SGLAPARDSI RVPLPLPISN NVVITPLSFP
IIKPDTSTAT FAQIGVDGQQ VDLTALNSTT AMSRRALRDD MPGIILRTTV RAITKGVAQK
KINETNPLAG LAVGISSAVL EGADTRTWRT LPDTTQVVRL RLKKGEHQVT LPSAVGGSQV
KITVDQRYQV ITLRAVGNQV FAAGIAAHVT PSAGATAVAS LKQP