Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5470 |
Symbol | |
ID | 3713852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 6137427 |
End bp | 6139322 |
Gene Length | 1896 bp |
Protein Length | 631 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | cytochrome c, class I |
Protein accession | YP_351198 |
Protein GI | 77461691 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.343465 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0783661 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCCG CGTCCCGATT TCTGGCCTGG CTGGTGTTCC CGTTGTGCGC CCTGAGCAGC TTCAATCTGC TGGCCGACAC CGTGGAAGGC GCGCCGCAAG CGCTGCACCT GCTCGATTAC ATCAGCGCCG ATTACCCGCC GACGGTTGAG GCAGGCAAGG TCATTGACGA CGGCGAATAC CGCGAGCAGC TGGAATTCAC CCAAGTGCTG CAAGGGCTGA TCGCCGGCCT GCCGGCCAAG CCGGAAAAAG TGGCGCTGGA GCAGGGCGTC ACTGCCTTGC ACGCCGCGAT CACGGCGAAA CAGGATGGCG CGGACGTCGC CCGTCAGGCC CGGCAACTGG GGGCGAAACT GGCGGTGGCC TATGAAGTCA GCCAGGCCCC GATCATCACG CCTGATCCGA CCCGTGGTGC GCCGCTCTAC GCGCAAAACT GCTCGGTGTG CCACGGCGAC GCGGGTGCCG GCGACGGCCC GGCAGGTCTC GGCATGACGC CGGCGCCAGC CAATCTGCGC GATACTGCGC GGATGGATCA CCTGAGCCTG TACGCGATCT ACAGCACCCT CGGCCAGGGC GTCGAAGGCA CTGACATGCC AGCCTTTGCC GATCAACTGG ACGACCGTCA GCGCTGGGAT CTGGCGACCT ATATCGCGCA GTTCAGCGCC GATCCGGCCA CGGCCAAATC CGACAAGACC TACAATATCG CCGACCTGGC CCGCCAGACC CCGGCCGAAG TGCAGGCCGC CGAAGGCCCT GAAGCCGCGG CGATCTTCCG TGTACAACGG GCGCAGCCGC CGCAGGTCAA ACGCGGCCCG GCGCAGTTGC TCGACTACAC TGCCGCGACG CTGGACAAGA GCCTGGCGGC GTACCGCGCC GGTGAACACG ATCAGGCTTA CGACCTGTCG GTGGCGGCGT ATCTGGAAGG CTTCGAACTG GTCGAGAGCT CGCTGGACAA CGTCGACGCC AACGTGCGCA AGGACACCGA AAAATCCCTG ATGGCCTATC GGCAATCGCT GCAGGACGGC TTGCCGGTCG AGCAGGCCGA ACAGCGTCTT GACGCGGCCA AGGCCAAACT CAAGGAGTCT GCCGGCCTGT TGGGCAGCGA TGGATTGAGC TGGTCGCTGA GCTACATTTC CGGTCTGCTG ATTCTGCTGC GCGAAGGCCT GGAAGCGATT CTGGTGCTGG CGGCGATCCT CGCGTTCCTG CGCAACACCG GCCAGCAATC GGCGGTGCGC AGCGTCAACG TCGGCTGGGG GCTGGCGCTG CTGGCTGGCC TGGGAACCTG GGCGCTGGCG GCCTATGTGA TCGATGTCAG CGGCTCCCAG CGTGAGCTGT TGGAAGGCGC CACGGCGCTG TTCGCCAGCG TCATGGTGTT GTGGCTCGGG GTGTGGATGC ACGACCGTCG GCACGCGGCG GCCTGGCAGG ATTACATCAA GCAGAGTCTG GTTGGCGGAG GCGGGCGTTT CGGGTTTGCG ATCCTGGCAT TCTTCTCGGT GTACCGCGAA CTGTTCGAAG TGATCCTGTT CTACGAAACC CTGTGGCTGC AGGCCGGTCC CGCCGGGCAT AACGCGGTAC TTGCTGGTGG TGCGACGGCA TTGGTGTTGC TGTTCGGTCT GGCGTGGGTG ATCCTGCGCG GCTCGGCGAA ACTGCCGCTG GCGCTGTTCT TCAGCATCAA CGCAGCGCTG CTGTGCGCGT TGTCGGTGGT GTTTGCCGGC CACGGCGTGA AGGCGCTGCA GGAAGCCGGG ATCTTCGGTA CCCGGCCGGT GGCGTTCTTC GATTTCGACT GGCTGGGGAT TCACGCCGAT GCGTATTCGC TGACGGCGCA GGCCGTGGCG ATCGCGGCGA TCATCGTGCT GTACGGTCGC AGTCGGGTGG CTGAAAAGCG CCGAGTGGCG GCTTGA
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Protein sequence | MTAASRFLAW LVFPLCALSS FNLLADTVEG APQALHLLDY ISADYPPTVE AGKVIDDGEY REQLEFTQVL QGLIAGLPAK PEKVALEQGV TALHAAITAK QDGADVARQA RQLGAKLAVA YEVSQAPIIT PDPTRGAPLY AQNCSVCHGD AGAGDGPAGL GMTPAPANLR DTARMDHLSL YAIYSTLGQG VEGTDMPAFA DQLDDRQRWD LATYIAQFSA DPATAKSDKT YNIADLARQT PAEVQAAEGP EAAAIFRVQR AQPPQVKRGP AQLLDYTAAT LDKSLAAYRA GEHDQAYDLS VAAYLEGFEL VESSLDNVDA NVRKDTEKSL MAYRQSLQDG LPVEQAEQRL DAAKAKLKES AGLLGSDGLS WSLSYISGLL ILLREGLEAI LVLAAILAFL RNTGQQSAVR SVNVGWGLAL LAGLGTWALA AYVIDVSGSQ RELLEGATAL FASVMVLWLG VWMHDRRHAA AWQDYIKQSL VGGGGRFGFA ILAFFSVYRE LFEVILFYET LWLQAGPAGH NAVLAGGATA LVLLFGLAWV ILRGSAKLPL ALFFSINAAL LCALSVVFAG HGVKALQEAG IFGTRPVAFF DFDWLGIHAD AYSLTAQAVA IAAIIVLYGR SRVAEKRRVA A
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