Gene Pfl01_5440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5440 
Symbol 
ID3714344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6105585 
End bp6106034 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content60% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_351168 
Protein GI77461661 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0611001 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTACT GGCTGATGAA ATCCGAGCCC GACGAGCTCT CGATCAAGGG CCTGGAAAAG 
CTCGGCAAGG CGCGCTGGGA CGGGGTTCGC AACTATCAGG CACGCAATTT CCTGCGGGCC
ATGGCGGTGG GGGACGAATT CTTTTTCTAC CACTCCAGCT GCCCGGAGCC GGGAATTGCC
GGAATCGGCA AAATAATCGA AGCCGCGTAC CCGGATCCCA CCGCACTGGA ACCGCAAAGC
CATTACTACG ACCCGAAAGC CACCCCGGAT AAAAACCCCT GGAGCGCGAT TGATGTCGCC
CACGTCGAAA CTTTCAGCCG GGTCTTGAAG CTGGATTATC TGAAACAGCA GACCGCGTTG
GCCGAGATGC CGCTGGTGCA GAAGGGCTCG CGACTGTCGG TGATGCCGGT GACGGCCGAG
CAGTGGGCGG CAGTACTCGG TTTGCGCTGA
 
Protein sequence
MAYWLMKSEP DELSIKGLEK LGKARWDGVR NYQARNFLRA MAVGDEFFFY HSSCPEPGIA 
GIGKIIEAAY PDPTALEPQS HYYDPKATPD KNPWSAIDVA HVETFSRVLK LDYLKQQTAL
AEMPLVQKGS RLSVMPVTAE QWAAVLGLR