Gene Pfl01_5407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5407 
Symbol 
ID3714429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6070936 
End bp6072294 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content62% 
IMG OID 
ProductL-glutamine synthetase 
Protein accessionYP_351135 
Protein GI77461628 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000279947 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGTAACA ACCTCGACCA GCTCACCGAT TGGTTGAAAG ACCACAAGAT CACAGAAGTC 
GAATGCATGA TCGGCGACTT GACCGGCATC ACCCGGGGCA AGATCTCGCC GACCAACAAG
TTCATCGCCG AAAAAGGCAT GCGCCTGCCA GAGAGCGTTC TGTTGCAGAC CGTGACCGGC
GACTACGTCG AAGACGACAT CTATTACGAA CTGCTCGACC CGGCCGACAT CGACATGATC
TGCCGCCCCG ACCAGAACGC CGTGTACCTG GTGCCGTGGG CCATCGAGCC GACCGCCCAG
GTGATCCACG ATACCTACGA CAAGCAAGGC AACCCGATCG AGCTGTCGCC GCGCAACGTC
CTCAAGAAAG TCCTGAAACT CTATGCCGAC AAGGGCTGGC AGCCGATCGT GGCGCCGGAA
ATGGAGTTCT ACCTGACCAA GCGCAGCGAC GACCCTGACT ATCCGTTGCA GCCGCCAGTC
GGCCGCTCCG GGCGTCCGGA GATCGGTCGT CAGTCGTTCT CCATCGAAGC GGCGAACGAA
TTCGATCCGC TGTTCGAAGA CGTCTACGAC TGGTGCGAAT TGCAGGAACT GGACCTCGAC
ACGCTGATCC ACGAGGACGG CACGGCGCAG ATGGAAATCA ACTTCCGTCA CGGCGATGCC
CTGTCGCTGG CCGACCAGAT CCTGGTGTTC AAGCGCACCA TGCGCGAGGC CGCCCTCAAG
CACAACGTGG CCGCGACCTT CATGGCCAAG CCGATGACCG GCGAGCCGGG CAGTGCGATG
CACCTGCACC AGAGCATCAT CGACATCGAG ACTGGCAAAA ACGTGTTCTC CAATGACGAC
GGGACCATGA GCCAGCTGTT CCTGCACCAC ATCGGTGGCC TGCAGAAACT GATCCCTGAG
CTGTTGCCGC TGTTCGCACC GAACGTCAAC TCGTTCCGCC GCTTCCTGCC GGACACCTCG
GCGCCGGTGA ACGTGGAGTG GGGCGAAGAA AACCGCACCG TGGGCCTGCG CGTACCGGAT
GCCGGCCCGC AGAACCGCCG GGTGGAAAAC CGCCTGCCGG GCGCCGACGC CAACCCGTAC
CTGGCGATTG CCGCGAGCCT GCTCTGCGGC TACATCGGCA TGGTCGAAGG CATCAACCCG
AGCGCGCCGG TCGTGGGCCG TGGTTACGAG CGCCGCAACC TGCGCCTGCC GCTGACCATC
GAGGACGCGC TGGAGCGTAT GGAAAACAGC GCGACCATCG AGAAGTATCT GGGCAAGACC
TTCATCACCG GCTACGTCGC GGTCAAGCGG GCCGAGCATG AAAACTTCAA GCGCGTGATC
AGTTCCTGGG AGCGTGAGTA CCTGCTCTTC GCCGTCTGA
 
Protein sequence
MSNNLDQLTD WLKDHKITEV ECMIGDLTGI TRGKISPTNK FIAEKGMRLP ESVLLQTVTG 
DYVEDDIYYE LLDPADIDMI CRPDQNAVYL VPWAIEPTAQ VIHDTYDKQG NPIELSPRNV
LKKVLKLYAD KGWQPIVAPE MEFYLTKRSD DPDYPLQPPV GRSGRPEIGR QSFSIEAANE
FDPLFEDVYD WCELQELDLD TLIHEDGTAQ MEINFRHGDA LSLADQILVF KRTMREAALK
HNVAATFMAK PMTGEPGSAM HLHQSIIDIE TGKNVFSNDD GTMSQLFLHH IGGLQKLIPE
LLPLFAPNVN SFRRFLPDTS APVNVEWGEE NRTVGLRVPD AGPQNRRVEN RLPGADANPY
LAIAASLLCG YIGMVEGINP SAPVVGRGYE RRNLRLPLTI EDALERMENS ATIEKYLGKT
FITGYVAVKR AEHENFKRVI SSWEREYLLF AV