Gene Pfl01_5399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5399 
Symbol 
ID3714753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6062069 
End bp6063034 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content67% 
IMG OID 
Producttranscriptional regulator 
Protein accessionYP_351127 
Protein GI77461620 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.654414 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00149287 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACAGAA CCGTCGCCAT CGTGGTGTTC CCCGGCGTGC AGGCGCTGGA CGTCAGCGGG 
CCGATGGACG TGTTTGCCGA GGCCAACCGC TTCCTGGCGC CGGAGGATCA TTACCGGCTC
GACGTGATCG GCGTCGAGCG CGGGCCGATG GCGTGTTCCA ACGGGCTGAC CCTGAGTGCG
CATCGGCACT TCAGCGACGT GCAGGACGCT TACGACCTGC TGCTGGTGGC CGGTGGGCCG
CAGTTGCCGT TCCTGGATTT CGGCGAGGCG TTCGATGTCT GGCTGCGCGA GGCCTGTGGA
CGGGCGCGGC GATTCGGCTC GATCTGCAAT GGCGCATTCA TGCTAGCCCG TGCCGGGTTG
CTGGACGGGC GCACGGTCAC CACCCACTGG AACGACGCCG AGGCGCTGGC GCAGTTGTGC
CCGTCGAGCC GGGTCGAGGC TGATCGGTTG TATGTCGAGG ACGGCCAGCT CTACACCTCG
GCGGGGGTGA CGGCGGGGAT CGATCTGTCG CTGTACCTGC TGGCGCGTGA TCACGGGGCC
GAGGTCGCGC TGAGCGTGGC CAAGCGGCTG GTGGTGTTCA CCCAGCGCTC GGGCGGGCAG
TCGCAGTTCA GCCCGTTCCT CACGCCCCAT GCCGAGCCGA CGTCGGCGGT GGCGATGGTG
CAGTTGTACG TGCTGGCCAA TCTCACCGGC GACCTGACCA TTGCCGACCT GGCAAACGCG
GCGAACATGA GTGCGCGGAA TTTCTCTCGG GTGTTTGCGA GGGAGGCGAA GGTCACCCCG
GCGGAATTCG TCGAGCGAGC GCGGGTGGAT GCGGCGCGGG TGATGCTCGA AAGCACCACG
GCGCCGCTGA AGACCGTGGC GTATCAGTGC GGGTTTCGCG ATGCGCAACA TATGCGCAGT
GTGTTCAACC GGCGGCTGGG GGTGACGCCG CAGCAGTTCC GGCTGAATTT TGCGGCGATG
GTTTGA
 
Protein sequence
MNRTVAIVVF PGVQALDVSG PMDVFAEANR FLAPEDHYRL DVIGVERGPM ACSNGLTLSA 
HRHFSDVQDA YDLLLVAGGP QLPFLDFGEA FDVWLREACG RARRFGSICN GAFMLARAGL
LDGRTVTTHW NDAEALAQLC PSSRVEADRL YVEDGQLYTS AGVTAGIDLS LYLLARDHGA
EVALSVAKRL VVFTQRSGGQ SQFSPFLTPH AEPTSAVAMV QLYVLANLTG DLTIADLANA
ANMSARNFSR VFAREAKVTP AEFVERARVD AARVMLESTT APLKTVAYQC GFRDAQHMRS
VFNRRLGVTP QQFRLNFAAM V