Gene Pfl01_5367 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5367 
Symbol 
ID3714780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6027921 
End bp6028946 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content62% 
IMG OID 
Productextracellular solute-binding protein 
Protein accessionYP_351095 
Protein GI77461588 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAGC CTATGGCCCT GGCCGCTGCT GTGCTCGCTG CTTTCAGCCT GAATGCCTTC 
GCGGCAAAAA CCGAGTTGAC GGTGTACACC GCCCTCGAAG CCGAGCAGTT GAAGTCCTAC
AAAGAGGCCT TCGAAAAGGC CAACCCGGAC GTCGAGATCA AGTGGGTGCG CGACTCCACC
GGGATCATCA CCGCCAAACT GCTGGCCGAA AAGGATCGCC CGCAGGCTGA CGCGGTGTGG
GGCCTGGCAG CATCGAGCCT GGCGATCCTC GATCAACAAG GCATGCTGCA AAGCTATGCG
CCGAAGGATC TGGGCAAGAT CGGCGCGAAC TACCGCGACG CCGCCAACCC GCCAGCCTGG
GTCGGCATGG ACGTCTGGGC CGCGACGATT TGCTTCAACA CCGTCGAGGC CGAGAAACAG
GGCCTGAGCA AACCGGTGAG CTGGCAGGAC CTGACCAAGC CTGAGTACAA GGGCAAGATC
GTGATGCCGA ACCCGGCTTC GTCCGGCACC GGTTTCCTCG ACGTCAGCGC CTGGCTGCAA
ACCTTCGGCG AGAAACAGGG CTGGGCCTAC ATGGACGGCC TGCACCAGAA CATCGGCCAG
TACGTTCACT CCGGTTCCAA GCCTTGCAAA CTGGCGGCGG CGGGCGAATT CCCGATCGGC
ATTTCCTTCG AATACCCGGC CGTTCAGCTC AAGCGTCAGG GCGCGCCGCT GGACATCATC
CTGCCGAAGG AAGGCCTGGG CTGGGAGATC GAAGCGACCG CCGTGATCAA AGGCACGCCG
CATGAAGAGG CCGCGAAGAA ACTGGCCGAC TTCTCCGCCA GCGCCCCGGC GATGGACCTG
TACAAGGAAA ACTTCGCTGT CCTCGCCCAG CCGGGCATCG CCAAGCCGCA GACCGAACTG
CCGGCCGACT ACGAGCAGCG CCTGATCAAG AACGACTTTG CCTGGGCCTC GAAGAACCGC
GACGAGATCC TGAGCGAATG GCGCAAGCGC TATGACGGCA AGTCCGAGAA AGTCGCGGCC
AAGTAA
 
Protein sequence
MFKPMALAAA VLAAFSLNAF AAKTELTVYT ALEAEQLKSY KEAFEKANPD VEIKWVRDST 
GIITAKLLAE KDRPQADAVW GLAASSLAIL DQQGMLQSYA PKDLGKIGAN YRDAANPPAW
VGMDVWAATI CFNTVEAEKQ GLSKPVSWQD LTKPEYKGKI VMPNPASSGT GFLDVSAWLQ
TFGEKQGWAY MDGLHQNIGQ YVHSGSKPCK LAAAGEFPIG ISFEYPAVQL KRQGAPLDII
LPKEGLGWEI EATAVIKGTP HEEAAKKLAD FSASAPAMDL YKENFAVLAQ PGIAKPQTEL
PADYEQRLIK NDFAWASKNR DEILSEWRKR YDGKSEKVAA K