| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5355 |
|---|
| Symbol | |
|---|
| ID | 3714826 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 6014091 |
|---|
| End bp | 6015164 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_351083 |
|---|
| Protein GI | 77461576 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.00756623 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.927738 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATATAA ACCCTTATTT ATTCATACTG CCACGAACGC CCGGCCAGAT AGTCTGGAAT
TACAAAGACC ATACTCAACA TGAACTTGAT CTTGAATATG CATCCCGACT GGCGCAACTT
GTCCACGACC CTGACCTATA TGACAACAGC AACATAATAG ACACACAGTT ATTAAATGCC
GGAATACTGA CTTCTTCAAA AATTCCGACA CCTGTCTGGG GCTGGGATGA ACTGTCCAGG
ATCTACCATA TCGGGACTCG GAATATTCCG TGCGAACACA CGCCCCGAAA CATTCAGGAA
TGGTGCAGGC AATACCTCGA GCACTGCAAC ACAGTGCTTG CCACTCCACC GTCGGCCGAC
ATCCCTGCGG ATACCTGTCC GAACCCACTC ATCGCCCTGC CCGAACCGCT GGCACTGAAG
GACGACAGCC TGTTGAGTTC ACTGACCCGA CGAAAGACCT GCCGCTCCTT CACCGGTGCC
GCCGTTTCGC TGGATGATGT CGGCACCTTG CTTTACCTGT CACTCGGCTA CCTGCGAGAA
CGCGCAGCCG ACCGCGACGA CAGCATCGCC GACGGACTTG GAGCGCGACG CAGCAGCCCT
TCCGGAGGCG GCCTCAATGC CTGCGCCGGG TTCGTGCTGG TGCAGAACGT CGACGCACTG
GCGCCTGGCG TCTACGTCTA CCACCCTGCC GAACACGCCC TGAGCTTCAT CAGTCCCTTG
CCCGACAGCG AATTTGGCAA TCTGCTGGGG GGCCAGCACT TCATCAACAA CCTGCCATTG
GGCCTGTTCA TCACCGCCCG CTTCGACCGG CTCTGGTGGA AATACCCGCA TTCGCGCGCC
TATCGAATGG CGTTCGTCGA AGCCGGGCAC CTTTCGCAGA CGTTTCAACT GGTGGCCACC
GCGCTAGGCA TGAACACCTG GCTCACGGGC GCGTTTTCCG ATGAGCAGGT CGAAACATTG
CTGAAGCTCG AGAACAGTGC GGAACAACCC TTGTTCTTCG TCGGTTGCGG GGAAAGCGAT
GGCCAAGCGA TGTGTCAGGA AATGCGCGAC CTGCTGCGTG AGGCACAGTC ATGA
|
|---|
| Protein sequence | MHINPYLFIL PRTPGQIVWN YKDHTQHELD LEYASRLAQL VHDPDLYDNS NIIDTQLLNA
GILTSSKIPT PVWGWDELSR IYHIGTRNIP CEHTPRNIQE WCRQYLEHCN TVLATPPSAD
IPADTCPNPL IALPEPLALK DDSLLSSLTR RKTCRSFTGA AVSLDDVGTL LYLSLGYLRE
RAADRDDSIA DGLGARRSSP SGGGLNACAG FVLVQNVDAL APGVYVYHPA EHALSFISPL
PDSEFGNLLG GQHFINNLPL GLFITARFDR LWWKYPHSRA YRMAFVEAGH LSQTFQLVAT
ALGMNTWLTG AFSDEQVETL LKLENSAEQP LFFVGCGESD GQAMCQEMRD LLREAQS
|
|---|
| |