Gene Pfl01_5352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5352 
Symbol 
ID3714823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6010746 
End bp6011612 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content59% 
IMG OID 
Productsignal transduction protein 
Protein accessionYP_351080 
Protein GI77461573 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.194147 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAAG AGCTGACCAC CGAACAGATT CAACAGTCCC TGCAAGGCAT CAGCGTGCCC 
GCGCAGCCGC AGATCATGGT GGATCTGCAA ATGGAGCAAT ACATGCCCGA TCCCGACCTA
GAGACGATCG CCAAGCTGAT CTCCCAGGAT CCCGGCCTGT CCGGCTCGCT GCTGAAGATC
GTCAATTCGC CCTATTACGG CCTGAGCAAC AAGATCACCT CGATCAAGCG CGCGGTGAAT
CTGTTGGGCA GTCGCTCGAT CATCAATCTG ATCAACGCGA TGTCGATCAA GGGTGAAATG
AACGACGACA CCATCGTCAC CCTCAACCGT TTCTGGGACA CCGCCCAGGA CGTGGCCATG
ACCTGCCTGA CCCTGGCCAA GCGCGTCGGC ACCGAGGCCA GCGACGAGGC TTATGCCTTG
GGTCTGTTCC ACGACTGCGG CGTGCCGCTG ATGCTTCAGC GTTTCCCGGA TTACATGACG
ACGCTCGAAA AGGCCTACGC CAACGCGAGT GCCGAGCGCC GGGTCGTGGA CACCGAGAAC
GACGTCTACA ACACCAATCA CTCGGTGGTC GGTTACTACA CCGCGAAGTC CTGGCGCCTG
CCGGAACACG TCAGCGCGGC CATCGCCAAT CACCACAATG CCCTGGCGAT CTTCAGCGAT
GAGACTTCGC GCAACAGTCA GATGAAAAAC CTGCTGGCGA TCCTGAAAAT GGCCGAGCAC
ATCTGCGCGT CCTACCGGGT ACTGGGCAAC CAGACCGAAG ACTTCGAATG GCAGGCCGTC
GGGCCGCTGG TGCTCGAATA CATCGGCCTC TCGGATTACG ACTTCGAAAC GTTGAAGCAG
ACGATTCGCG AACTTGGCGC GCACTGA
 
Protein sequence
MSQELTTEQI QQSLQGISVP AQPQIMVDLQ MEQYMPDPDL ETIAKLISQD PGLSGSLLKI 
VNSPYYGLSN KITSIKRAVN LLGSRSIINL INAMSIKGEM NDDTIVTLNR FWDTAQDVAM
TCLTLAKRVG TEASDEAYAL GLFHDCGVPL MLQRFPDYMT TLEKAYANAS AERRVVDTEN
DVYNTNHSVV GYYTAKSWRL PEHVSAAIAN HHNALAIFSD ETSRNSQMKN LLAILKMAEH
ICASYRVLGN QTEDFEWQAV GPLVLEYIGL SDYDFETLKQ TIRELGAH