Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5352 |
Symbol | |
ID | 3714823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 6010746 |
End bp | 6011612 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | signal transduction protein |
Protein accession | YP_351080 |
Protein GI | 77461573 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.194147 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCAAG AGCTGACCAC CGAACAGATT CAACAGTCCC TGCAAGGCAT CAGCGTGCCC GCGCAGCCGC AGATCATGGT GGATCTGCAA ATGGAGCAAT ACATGCCCGA TCCCGACCTA GAGACGATCG CCAAGCTGAT CTCCCAGGAT CCCGGCCTGT CCGGCTCGCT GCTGAAGATC GTCAATTCGC CCTATTACGG CCTGAGCAAC AAGATCACCT CGATCAAGCG CGCGGTGAAT CTGTTGGGCA GTCGCTCGAT CATCAATCTG ATCAACGCGA TGTCGATCAA GGGTGAAATG AACGACGACA CCATCGTCAC CCTCAACCGT TTCTGGGACA CCGCCCAGGA CGTGGCCATG ACCTGCCTGA CCCTGGCCAA GCGCGTCGGC ACCGAGGCCA GCGACGAGGC TTATGCCTTG GGTCTGTTCC ACGACTGCGG CGTGCCGCTG ATGCTTCAGC GTTTCCCGGA TTACATGACG ACGCTCGAAA AGGCCTACGC CAACGCGAGT GCCGAGCGCC GGGTCGTGGA CACCGAGAAC GACGTCTACA ACACCAATCA CTCGGTGGTC GGTTACTACA CCGCGAAGTC CTGGCGCCTG CCGGAACACG TCAGCGCGGC CATCGCCAAT CACCACAATG CCCTGGCGAT CTTCAGCGAT GAGACTTCGC GCAACAGTCA GATGAAAAAC CTGCTGGCGA TCCTGAAAAT GGCCGAGCAC ATCTGCGCGT CCTACCGGGT ACTGGGCAAC CAGACCGAAG ACTTCGAATG GCAGGCCGTC GGGCCGCTGG TGCTCGAATA CATCGGCCTC TCGGATTACG ACTTCGAAAC GTTGAAGCAG ACGATTCGCG AACTTGGCGC GCACTGA
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Protein sequence | MSQELTTEQI QQSLQGISVP AQPQIMVDLQ MEQYMPDPDL ETIAKLISQD PGLSGSLLKI VNSPYYGLSN KITSIKRAVN LLGSRSIINL INAMSIKGEM NDDTIVTLNR FWDTAQDVAM TCLTLAKRVG TEASDEAYAL GLFHDCGVPL MLQRFPDYMT TLEKAYANAS AERRVVDTEN DVYNTNHSVV GYYTAKSWRL PEHVSAAIAN HHNALAIFSD ETSRNSQMKN LLAILKMAEH ICASYRVLGN QTEDFEWQAV GPLVLEYIGL SDYDFETLKQ TIRELGAH
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