Gene Pfl01_5338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5338 
Symbol 
ID3714907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5997841 
End bp5999196 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content64% 
IMG OID 
Productpeptidase M16-like 
Protein accessionYP_351066 
Protein GI77461559 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.796458 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCTC TAGCCCGCCG CGCCGCAGGC CTGCTGCTCA GCACAGTCTG CCTGCCCCTT 
TCGGCCCTGG CGGCCGACCC GCAACCGACA CACGAATTCA CCCTCGACAA CGGCCTGAAG
GTCGTCGTGC GCGAAGACCA TCGCGCGCCG GTGGTAGTGT CGCAGGTCTG GTACAAGGTC
GGCTCCAGCT ACGAAACTCC GGGCCAGACC GGTCTGTCCC ACGCCCTCGA GCACATGATG
TTCAAGGGCA GCGAGAAAGT CGGCCCCGGC GAAGCCTCGC TGATCCTGCG CGACCTCGGC
GCCGAAGAGA ACGCGTTCAC CAGCGACGAC TTCACCGCTT ATTACCAGGT GCTGGCCCGC
GACCGTCTGG GCGTGGCCTT CGAACTGGAA GCCGACCGCA TGGCCAACCT GCGCCTGCCG
GCCGACGAGT TCGCCAAGGA AATCGAAGTC ATCAAGGAAG AGCGCCGTCT GCGCACCGAC
GACAAGCCGA TGGCCAAGGC CTACGAGCGC TACAAGGCCA TGGCCTACCC GGCCAGCGGT
TACCACACGC CGACCATCGG CTGGATGGCC GACCTTGAGC GGATGAAGGT CGAAGAGCTG
CGCCACTGGT ATCAGTCCTG GTACGTGCCG AACAACGCCA CACTGGTGGT GGTCGGCGAC
GTGACCCCGG ACGAGGTGAA GACCCTCGCC CAGCGCTACT TCGGGCCGAT CCCGAAACGC
GACGTGCCGC CGGCGAAAAA GCCGCTGGAA CTGGCCGAAC CGGGTGAACG CCAGATCACC
CTGCACGTGC AGACTCAACT GCCGAGCCTG ATGCTTGGTT TCAACGTCCC GAGCATCGCC
ACCGCCGAAG ACAAACGTTC GGTCAACGCC TTGCGCCTGA TTTCGGCGCT GCTGGACGGC
GGCTACAGCG GTCGCATCCC GACCCAACTG GAGCGTGGCG AAGAACTGGT GTCCGGCGGT
TCGTCGAGCT ACGACGCCTA CACCCGCGGC GACAGCCTTT TCACCCTGTC GGCCACGCCG
AACACCCAGA AGAAAAAGAC CATGGCCCAG GCGGAAGCCG GCCTGTGGAA ACTGCTGGAG
CAGCTGAAAA CCAGCGCACC GTCCGCCGAA GAACTGGAAC GCGTGCGTGC GCAGGTCATC
GCCGGTCTGG TCTTCGAGCG TGATTCGATC ACCAGCCAGG CCACCGCCAT CGGCCAGCTG
GAGACCGTCG GTCTGTCGTG GAAGCTGATG GACACCGAAC TGGCCGACCT GGAAAGCGTC
ACCCCGCAAG ACATCCAGAA CGCCGCCAAG CTGTATTTCA CCCGCGAACG TCTCAGCGTC
GCCCACGTCC TGCCACTGGA GACGACTCAT GAGTGA
 
Protein sequence
MNALARRAAG LLLSTVCLPL SALAADPQPT HEFTLDNGLK VVVREDHRAP VVVSQVWYKV 
GSSYETPGQT GLSHALEHMM FKGSEKVGPG EASLILRDLG AEENAFTSDD FTAYYQVLAR
DRLGVAFELE ADRMANLRLP ADEFAKEIEV IKEERRLRTD DKPMAKAYER YKAMAYPASG
YHTPTIGWMA DLERMKVEEL RHWYQSWYVP NNATLVVVGD VTPDEVKTLA QRYFGPIPKR
DVPPAKKPLE LAEPGERQIT LHVQTQLPSL MLGFNVPSIA TAEDKRSVNA LRLISALLDG
GYSGRIPTQL ERGEELVSGG SSSYDAYTRG DSLFTLSATP NTQKKKTMAQ AEAGLWKLLE
QLKTSAPSAE ELERVRAQVI AGLVFERDSI TSQATAIGQL ETVGLSWKLM DTELADLESV
TPQDIQNAAK LYFTRERLSV AHVLPLETTH E