Gene Pfl01_5326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5326 
Symbol 
ID3715030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5987966 
End bp5988562 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content65% 
IMG OID 
Productputative deoxyribonucleotide triphosphate pyrophosphatase 
Protein accessionYP_351054 
Protein GI77461547 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.421617 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAATC TCAAGCAACT CGTACTGGCC AGCCATAACG CCGGCAAACT CAAGGAACTC 
CAGGCCATGC TCGGCGACTC GGTGCAACTG CGCTCGATCG GCGAATTCAG CAGCGTGGAG
CCGGAAGAAA CCGGCCTGTC GTTCGTCGAG AACGCGATCC TCAAGGCGCG CAATGCCGCG
CGCATTTCCG GTCTGCCGGC GCTGGCCGAC GACTCGGGTC TGGCGGTGGA TTTCCTCGGC
GGTGCGCCGG GCATCTACTC GGCGCGCTAC GCCGACGGCA AGGGCGACGC GGCGAACAAT
GCCAAATTGC TCGACGCCTT GAAGGACGTG CCGGAAGCCG AACGCGGCGC GCAGTTCGTC
TGCGTGCTGG CGCTGGTGCG TCACGCCGAC GATCCGCTGC CGATCCTCTG CGAAGGCCTG
TGGCACGGGC GCATTCTGAC CGCCGCCAGC GGTGAGCACG GTTTCGGCTA CGACCCATTG
TTCTGGGTGC CGGAGCGTAA CGTGTCCAGC GCCGAACTGA GCCCGAGCGA CAAGAACCAG
ATCAGTCACC GCGCCCGTGC AATGGATCTG CTGCGCCAGC GTCTGGGCTT GAAATGA
 
Protein sequence
MINLKQLVLA SHNAGKLKEL QAMLGDSVQL RSIGEFSSVE PEETGLSFVE NAILKARNAA 
RISGLPALAD DSGLAVDFLG GAPGIYSARY ADGKGDAANN AKLLDALKDV PEAERGAQFV
CVLALVRHAD DPLPILCEGL WHGRILTAAS GEHGFGYDPL FWVPERNVSS AELSPSDKNQ
ISHRARAMDL LRQRLGLK