Gene Pfl01_5300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5300 
Symbol 
ID3715196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5961359 
End bp5961658 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content65% 
IMG OID 
Productmalonate decarboxylase subunit delta 
Protein accessionYP_351028 
Protein GI77461521 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0185223 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.233659 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACCT TATCCTTTGA ATTCCCCGCC GGGCAGCCGC CGCGTGGTCG GGCGCTGGTC 
GGTTGTGTCG GTTCGGGCGA TCTGGAAGTG CTGATCGAAC CAGGCCTGGC CGGTAGGCTG
ACGATCAACG TGCAGACCTC GGTCAATGGC GCCGAGCAGC GCTGGCAGCA TCTGTTTGCG
CGGATGTTCG ACGGCACCAC GCCACCGGCG ATGGCCATCG ATATCCACGA CTTCGGCGCG
ACCCCGGGCG TGGTGCGCCT GCGGCTGGAA CAAGGCTTCG AGGAGATCGG CCATGACTGA
 
Protein sequence
METLSFEFPA GQPPRGRALV GCVGSGDLEV LIEPGLAGRL TINVQTSVNG AEQRWQHLFA 
RMFDGTTPPA MAIDIHDFGA TPGVVRLRLE QGFEEIGHD