| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5298 |
|---|
| Symbol | |
|---|
| ID | 3715194 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 5959733 |
|---|
| End bp | 5960518 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | malonate decarboxylase gamma subunit |
|---|
| Protein accession | YP_351026 |
|---|
| Protein GI | 77461519 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.47948 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.25811 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGGTT ATTCCGTGCG CGGTTTGAAC TGGTTCAACG CCTTGAGCGC TGGTGCGAAT
GCGGTTGAAG GTTTGCCGCC ATCGCTGAAG GTCGCTGACG GGGCACTCGG GCGCTTGATC
GCGGTGGTCG CCGATCCGCA AAACCGTTTC CCTCGCGCCC GCAACGGCGA AGTCGGATTG
CTCGAAGGCT GGGGTCTGGC CAAGGCTGTG GATGACGCGA TCACCGCCGA CCAAGACAAA
TCGCAAAAGC GTCCCTTGAT CGCCATCGTC GATGTGCCGA GCCAGGCCTA CGGTCGCCGC
GAAGAAGCCC TCGGCATTCA CCAGGCCCTG GCCGGTGCGG CGGACGCTTA CGCCCGCGCG
CGTCTGGCCG GGCATCCGGT GATTGCGCTG CTGGTGGGCA AGGCCATGTC CGGGGCGTTT
CTGGCTCACG GCTACCAGGC CAACCGCTTG ATCGCTCTGC GTGATCCGGG GGTGATGGTG
CATGCGATGG GCAAGGCGTC GGCGGCGCGG GTGACGTTGC GCAGCGTCGA AGAACTGGAA
GCCCTGGCGT CCAGCGTGCC GCCGATGGCC TATGACATCG ACAGCTACGC CAGCCTCGGA
TTGCTCTGGG AAACCCTGTC GGTGCAGCAG ATCGAACAGC CGACGGCGGA GGATCAGGCG
CGGGTCAGCG AATGCTTGAA GCAAGCGATC AGCGATATTG CGGCGACTGA TTTGAGCAAT
CGTCTCGGCG CGAAAAATCG CGAAGCCTCC AGCCGCGTGC GTGAATTGCT GAGGGCGCAG
TGGTGA
|
|---|
| Protein sequence | MSGYSVRGLN WFNALSAGAN AVEGLPPSLK VADGALGRLI AVVADPQNRF PRARNGEVGL
LEGWGLAKAV DDAITADQDK SQKRPLIAIV DVPSQAYGRR EEALGIHQAL AGAADAYARA
RLAGHPVIAL LVGKAMSGAF LAHGYQANRL IALRDPGVMV HAMGKASAAR VTLRSVEELE
ALASSVPPMA YDIDSYASLG LLWETLSVQQ IEQPTAEDQA RVSECLKQAI SDIAATDLSN
RLGAKNREAS SRVRELLRAQ W
|
|---|
| |