Gene Pfl01_5294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5294 
Symbol 
ID3715190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5956955 
End bp5957719 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content64% 
IMG OID 
Productmalonate/sodium symporter MadM subunit 
Protein accessionYP_351022 
Protein GI77461515 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0823289 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.439463 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGGATC TCATTGAAAA AGGTCTGGAA CACAACGGTC TGATCACCGC GTTCGCGTTC 
GTCGGCGTGA TCATGTGGGT TTCGGTGATT CTCTCCAAAC GCCTGACCTT CGGGCGGATT
CACGGCTCGG CGATTGCCAT CGTCATCGGT CTGGTGCTGG CCTGGGTCGG CGGGACGATG
ACGGGCGGGC AGAAAGGCCT GGCGGACCTG ACGCTGTTCT CCGGCATCGG CCTGATGGGC
GGCGCGATGC TGCGGGATTT CGCGATCGTT GCCACGGCGT TTGAAGTGCA GGCGACCGAG
GCGAAGAAGG CCGGGATGAT CGGCGTGATT GCGCTGCTGC TGGGCACGAT CCTGCCGTTC
ATTGTCGGTG CTTGCATGGC CTACGCGTTC GGTTATCGCG ATGCGGTGAG CATGACCACC
ATCGGCGCCG GTGCGGTGAC TTACATCGTC GGGCCAGTGA CTGGTGCAGC GATTGGCGCG
ACGTCGGATG TGATGGCGCT GTCGATTGCC ACCGGATTGA TCAAGGCGAT TCTGGTGATG
GTCGGCACGC CGGTGGCGGC GCGCTGGATG GGCCTGGATA ACCCGCGCTC GGCGATGGTG
TTTGGCGGGC TGGCCGGGAC CGTGAGTGGC GTGACGGCGG GGCTGGCGGC GACGGATCGG
CGGTTGGTGC CTTATGGGGC GTTGACCGCG ACCTTCCACA CTGGGCTTGG CTGCCTGCTT
GGGCCTTCGC TGCTGTTCTT CATTGTTCGC GGAATCGTTG GCTAG
 
Protein sequence
MWDLIEKGLE HNGLITAFAF VGVIMWVSVI LSKRLTFGRI HGSAIAIVIG LVLAWVGGTM 
TGGQKGLADL TLFSGIGLMG GAMLRDFAIV ATAFEVQATE AKKAGMIGVI ALLLGTILPF
IVGACMAYAF GYRDAVSMTT IGAGAVTYIV GPVTGAAIGA TSDVMALSIA TGLIKAILVM
VGTPVAARWM GLDNPRSAMV FGGLAGTVSG VTAGLAATDR RLVPYGALTA TFHTGLGCLL
GPSLLFFIVR GIVG