Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5294 |
Symbol | |
ID | 3715190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5956955 |
End bp | 5957719 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | malonate/sodium symporter MadM subunit |
Protein accession | YP_351022 |
Protein GI | 77461515 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0823289 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.439463 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGGATC TCATTGAAAA AGGTCTGGAA CACAACGGTC TGATCACCGC GTTCGCGTTC GTCGGCGTGA TCATGTGGGT TTCGGTGATT CTCTCCAAAC GCCTGACCTT CGGGCGGATT CACGGCTCGG CGATTGCCAT CGTCATCGGT CTGGTGCTGG CCTGGGTCGG CGGGACGATG ACGGGCGGGC AGAAAGGCCT GGCGGACCTG ACGCTGTTCT CCGGCATCGG CCTGATGGGC GGCGCGATGC TGCGGGATTT CGCGATCGTT GCCACGGCGT TTGAAGTGCA GGCGACCGAG GCGAAGAAGG CCGGGATGAT CGGCGTGATT GCGCTGCTGC TGGGCACGAT CCTGCCGTTC ATTGTCGGTG CTTGCATGGC CTACGCGTTC GGTTATCGCG ATGCGGTGAG CATGACCACC ATCGGCGCCG GTGCGGTGAC TTACATCGTC GGGCCAGTGA CTGGTGCAGC GATTGGCGCG ACGTCGGATG TGATGGCGCT GTCGATTGCC ACCGGATTGA TCAAGGCGAT TCTGGTGATG GTCGGCACGC CGGTGGCGGC GCGCTGGATG GGCCTGGATA ACCCGCGCTC GGCGATGGTG TTTGGCGGGC TGGCCGGGAC CGTGAGTGGC GTGACGGCGG GGCTGGCGGC GACGGATCGG CGGTTGGTGC CTTATGGGGC GTTGACCGCG ACCTTCCACA CTGGGCTTGG CTGCCTGCTT GGGCCTTCGC TGCTGTTCTT CATTGTTCGC GGAATCGTTG GCTAG
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Protein sequence | MWDLIEKGLE HNGLITAFAF VGVIMWVSVI LSKRLTFGRI HGSAIAIVIG LVLAWVGGTM TGGQKGLADL TLFSGIGLMG GAMLRDFAIV ATAFEVQATE AKKAGMIGVI ALLLGTILPF IVGACMAYAF GYRDAVSMTT IGAGAVTYIV GPVTGAAIGA TSDVMALSIA TGLIKAILVM VGTPVAARWM GLDNPRSAMV FGGLAGTVSG VTAGLAATDR RLVPYGALTA TFHTGLGCLL GPSLLFFIVR GIVG
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