| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5282 |
|---|
| Symbol | |
|---|
| ID | 3715350 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 5943355 |
|---|
| End bp | 5944167 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_351010 |
|---|
| Protein GI | 77461503 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTTGA TCACGCAGTT ATTCGCCGTG CTGGTTTTTG CTTGCCTGAG CTTTGCCGCT
CGGGGCGAGA AGCTGCGTAT CGTCACCGAG CCGTGGGCGC CGTACGTCTA TGAACAAGAC
GGCAAGAACC TCGGCCTGGA CTACGAAACC ACCGCCATCG TGTTCAAGCG TTTGGGCATC
GAAGTCGAAT GGCAGTTTTT GCCATGGAAA CGCTGCCTGT CGATGCTCGA AACCGGTCAG
GCCGACGGCG CGCTGGACAT CTTCCACAGC GACGAACGCG ACGCCACCCT GCTCTATCCG
AGCGAACCGC TGTCGGACGT CGAGTTCGTG CTGTTCTACG CCAACGAGCG ACCACACCCT
TTTAGAAGCC TGCAAGACCT CAAAGGCCTG ACCGTCGGCA CCTCGCCGGG CTATCTGTAC
AGCCCCGACT TTCGCGAATC GACCCTGTTC ACTCGGGAAC CGGCCCCGAC CCACGAAGCC
AATTTCGGCA AACTGGTGCG CGGGCGCATC GACCTGCTGA TCACCGATCG CCGCGTGGGT
CAGCATTTGC TCGATGAACT GGGCATTCGC GACAAGATTA CTGAGAACCC GACCGTCATC
AGCCGCCAGA GCCAGTTTCT GGCCGTGCGG CGCAACGCCG GGATGGATTT GCTGGTGCAG
CGCTTCGGTG CCGAACTGAA GCGTTTCAAG CGCGAACCGG CCTATGCCGA GCTCAGCGCC
CGCTACGGCG CGGCCCCCGC CCTGACGGCG CCGCTGGGCA ACGCCACCGC CAGCGGCAAA
ACCGTTGAGC AGCAGGAAAG CGGCGCGCAG TGA
|
|---|
| Protein sequence | MPLITQLFAV LVFACLSFAA RGEKLRIVTE PWAPYVYEQD GKNLGLDYET TAIVFKRLGI
EVEWQFLPWK RCLSMLETGQ ADGALDIFHS DERDATLLYP SEPLSDVEFV LFYANERPHP
FRSLQDLKGL TVGTSPGYLY SPDFRESTLF TREPAPTHEA NFGKLVRGRI DLLITDRRVG
QHLLDELGIR DKITENPTVI SRQSQFLAVR RNAGMDLLVQ RFGAELKRFK REPAYAELSA
RYGAAPALTA PLGNATASGK TVEQQESGAQ
|
|---|
| |