Gene Pfl01_5276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5276 
Symbol 
ID3715344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5936536 
End bp5937705 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content65% 
IMG OID 
Productmajor facilitator transporter 
Protein accessionYP_351004 
Protein GI77461497 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACTCG CCTTGCTTGC ACTCGCTGTT GCCGCTTTCG GCATCGGCAC CACTGAATTC 
GTCATCATGG GCCTGCTGCC CGATGTCGCT CGCGACCTCG CGGTGAGCAT TCCCCATGCG
GGCCTGTTGA TCACCGGCTA CGCCCTGGGC GTGGTGTTCG GTGCGCCGAT CCTCGCGATC
GGCACCGCCA ACATGCCGCG CAAGGCCACG CTGCTGGGCA TGACGCTGAT GTTCATTCTC
GGCAACGTGC TGTGCGCGTT GGCGCCTAAC TACGCGACAC TGATGGCGGC GCGCGTGGTC
ACCGCGCTGT GCCATGGGGC GTTCTTCGGC ATCGGTTCGG TGGTGGCCGC AGGGCTGGTC
GCACCGAACA AACGGGCGCA GGCGATTGCC ATGATGTTCA CCGGCCTGAC CCTGGCCAAC
GTCCTCGGCG TACCGCTGGG CACAGCACTC GGACAGTACG CCGGCTGGCG CTCGACCTTC
TGGGCGGTCT CGGTGATCGG AGTGATCGCG GCCCTCGCCC AATGGCTGTG GTTGCCGAAA
CACATCCCGA TGGACAAGGC CAACCTCGCC AGCGAATTCA AGGTGCTGGG CAAGGTCAAC
GTGTTGCTGG CGCTGGGTAT GAGCGTGCTC GCGTCCACCA GCCTGTTCAG TGTGTTCACC
TACATCGCGC CGATTCTGCA GGACATCACC GGCGTCAGCC CTCACGGAGT GACCGTGATG
CTACTGTTGT TCGGTGTCGG CCTCACCGGT GGCAGCATGC TCGGCGGACG CCTGGCCGAC
AGTCGTCTGT TGCCGTCGCT GGTGGGTGTC GCACTGGCGG TGGTGGTGAT TCTGGCGGCG
TTCAGCCAGA CCAGTCGTTC GGTGGTTCCG GCGGCGATCA CGCTGGTGCT GTGGGGGATT
TTTGCCTTCG CCCTGTGCCC GATCCTGCAA CTGCTGATCA TCGATCAGGC TCACGAGGCA
CCGAACCTCG GTTCGACCCT GAACCAGAGC GCGTTCAACC TCGGCAATGC CGCCGGCGCC
TGGATCGGCG GGCTGGTGGT GGCCAGTGGC GCGGATCTCG CGGACTTGCC CTGGACCGGC
GCGCTGGTGG GCGTGCTGAC CGTGCTGACG GCGCTGTTTT TCATCTACCT GCAACGTCGG
GGTGTCGCTG CGGTCAATGT GTCCGGCTGA
 
Protein sequence
MPLALLALAV AAFGIGTTEF VIMGLLPDVA RDLAVSIPHA GLLITGYALG VVFGAPILAI 
GTANMPRKAT LLGMTLMFIL GNVLCALAPN YATLMAARVV TALCHGAFFG IGSVVAAGLV
APNKRAQAIA MMFTGLTLAN VLGVPLGTAL GQYAGWRSTF WAVSVIGVIA ALAQWLWLPK
HIPMDKANLA SEFKVLGKVN VLLALGMSVL ASTSLFSVFT YIAPILQDIT GVSPHGVTVM
LLLFGVGLTG GSMLGGRLAD SRLLPSLVGV ALAVVVILAA FSQTSRSVVP AAITLVLWGI
FAFALCPILQ LLIIDQAHEA PNLGSTLNQS AFNLGNAAGA WIGGLVVASG ADLADLPWTG
ALVGVLTVLT ALFFIYLQRR GVAAVNVSG