Gene Pfl01_5173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5173 
Symbol 
ID3716763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5818500 
End bp5819306 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content62% 
IMG OID 
Productbiotin biosynthesis protein BioC 
Protein accessionYP_350901 
Protein GI77461394 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0205142 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.27831 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATT TGTCTGTCGC GGCGTTGCCC GGCGGCTTGC CTGACAAGCG CCAGGTCGCG 
GCTTCTTTTT CTCGCGCAGC GGCCAGCTAC GACAGCGTCG CCGAGTTGCA GCGCGATGTC
GGTACGCAGT TGATGAATCG CTTGCCGGTG GATTTTCGGC CGGCACGCTG GTTGGATCTG
GGCTGTGGCA CCGGGTATTT CACTCGGGCG CTGGCTGAGC GATTTGGTGA GGGGCTGGCA
CTGGATATCG CTGAGGGCAT GCTCCATCAC GCGCGGCCGT TGGGTGGGGC CATGCACTTT
ATTGCTGGCG ATGCCGAACG TTTGCCATTA CAGGATTCGA CCTGCGATCT GATCTTCTCC
AGCCTCGCCG TGCAGTGGTG CGCGGACTTC GAAGCGGTGC TCGGCGAAGC GTTTCGGGTG
CTGAAACCTG GGGGGATTTT CGCGTTTGCT AGTCTTTGTG CAGGGACGCT GTACGAATTG
CGCGATAGCT GGCGTCAGGT CGATGGTCTG GTGCACGTCA ACCGCTTCCG CGAATTCGCC
CGCTACGAGC AATTGTGCGC GGCCAGTGGT TTGCGCAGTG TTTGTCTGGA GAACCGGCCG
CATGTGCTGC ATTACCCGGA TGTGCGCAGC CTGACCCATG AACTCAAGGC CTTGGGCGCG
CATAACCTGA ACCCTGGCCG GCCGGGTGGA TTGACCGGGC GGGCGCGGAT TCTGGGGCTG
GTCGAGGCCT ACGAGCAGTT CCGTCAGCCT GCGGGATTGC CGGCGACCTA CCAGGTGGTC
TACGCCGTGT TGGAGAAACC CTTATGA
 
Protein sequence
MTDLSVAALP GGLPDKRQVA ASFSRAAASY DSVAELQRDV GTQLMNRLPV DFRPARWLDL 
GCGTGYFTRA LAERFGEGLA LDIAEGMLHH ARPLGGAMHF IAGDAERLPL QDSTCDLIFS
SLAVQWCADF EAVLGEAFRV LKPGGIFAFA SLCAGTLYEL RDSWRQVDGL VHVNRFREFA
RYEQLCAASG LRSVCLENRP HVLHYPDVRS LTHELKALGA HNLNPGRPGG LTGRARILGL
VEAYEQFRQP AGLPATYQVV YAVLEKPL