Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5084 |
Symbol | rpsL |
ID | 3715946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5709744 |
End bp | 5710115 |
Gene Length | 372 bp |
Protein Length | 123 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | 30S ribosomal protein S12 |
Protein accession | YP_350812 |
Protein GI | 77461305 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.000372419 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.521213 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACTA TCAACCAGCT GGTACGTCAG CCGCGTAAGC GTATCGTCGA GAAATCCGAC GTGCCTGCGC TGCAGAACTG CCCGCAACGT CGTGGCGTGT GCACCCGTGT GTACACCACT ACGCCGAAAA AACCTAACTC GGCACTGCGT AAAGTATGCC GTGTGCGTCT GACCAACGGT TTCGAGGTTT CCTCGTACAT CGGTGGTGAA GGCCACAACC TGCAAGAGCA CAGCGTGGTA CTGATCCGCG GCGGTCGTGT AAAAGACTTG CCAGGTGTTC GTTACCACAC CGTTCGCGGC TCCTTGGATA CTTCCGGCGT TAAAGGCCGT AACCAGGGTC GTTCGAAGTA CGGTACCAAG CGTCCGAAGT AA
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Protein sequence | MATINQLVRQ PRKRIVEKSD VPALQNCPQR RGVCTRVYTT TPKKPNSALR KVCRVRLTNG FEVSSYIGGE GHNLQEHSVV LIRGGRVKDL PGVRYHTVRG SLDTSGVKGR NQGRSKYGTK RPK
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