Gene Pfl01_5084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5084 
SymbolrpsL 
ID3715946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5709744 
End bp5710115 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content56% 
IMG OID 
Product30S ribosomal protein S12 
Protein accessionYP_350812 
Protein GI77461305 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.000372419 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.521213 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACTA TCAACCAGCT GGTACGTCAG CCGCGTAAGC GTATCGTCGA GAAATCCGAC 
GTGCCTGCGC TGCAGAACTG CCCGCAACGT CGTGGCGTGT GCACCCGTGT GTACACCACT
ACGCCGAAAA AACCTAACTC GGCACTGCGT AAAGTATGCC GTGTGCGTCT GACCAACGGT
TTCGAGGTTT CCTCGTACAT CGGTGGTGAA GGCCACAACC TGCAAGAGCA CAGCGTGGTA
CTGATCCGCG GCGGTCGTGT AAAAGACTTG CCAGGTGTTC GTTACCACAC CGTTCGCGGC
TCCTTGGATA CTTCCGGCGT TAAAGGCCGT AACCAGGGTC GTTCGAAGTA CGGTACCAAG
CGTCCGAAGT AA
 
Protein sequence
MATINQLVRQ PRKRIVEKSD VPALQNCPQR RGVCTRVYTT TPKKPNSALR KVCRVRLTNG 
FEVSSYIGGE GHNLQEHSVV LIRGGRVKDL PGVRYHTVRG SLDTSGVKGR NQGRSKYGTK
RPK