| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5076 |
|---|
| Symbol | rplB |
|---|
| ID | 3715938 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 5702866 |
|---|
| End bp | 5703690 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | 50S ribosomal protein L2 |
|---|
| Protein accession | YP_350804 |
|---|
| Protein GI | 77461297 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000000626966 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.299104 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATCG TTAAATGCAA ACCGACTTCC CCTGGCCGCC GTTTTGTGGT CAAGGTGGTC
AACCAGGAGC TGCATAAAGG CGCTCCTCAC GCACCGCTGC TCGAGAAAAA GTCGAAGTCT
GGTGGTCGTA ACAACAATGG CCGTATTACC ACTCGTCACA TTGGTGGTGG TCATAAGCAG
CATTATCGTC TGGTCGACTT CCGTCGCAAC GACAAAGATG GCATCGCTGC CACTGTCGAG
CGTATCGAAT ACGATCCAAA CCGTACTGCT CACATCGCTC TGCTGCTGTA CGCAGATGGC
GAGCGTCGCT ACATCATCGC CCCTAAAGGC GTGAGCGCTG GCGACCAGCT GATCGCAGGT
GCTCTGGCAC CGATCAAGCC GGGCAACGCT CTGCAACTGC GCAACATTCC AGTTGGTAGC
ACCGTACACG GCATCGAACT GAAGCCAGGT AAGGGCGCAC AAATCGCTCG TTCCGCTGGT
GCTTCGGCTC AGCTGATCGC TCGTGAAGGC GTTTACGTGA CCCTGCGTCT GCGTTCCGGT
GAAATGCGTA AAGTACTGGC TGAGTGCCGT GCGACCCTGG GCGAAGTCTC GAACTCCGAG
CACAGCCTGC GTTCGCTGGG TAAAGCTGGT GCCAAACGCT GGCGTGGCGT TCGCCCAACC
GTTCGTGGTG TTGCCATGAA CCCGGTTGAC CACCCACATG GTGGTGGTGA AGGTCGTACC
TCTGGTGGTC GTCATCCGGT ATCGCCATGG GGCTTCCCGA CTAAGGGCGC GAAGACTCGT
GGTAATAAGC GTACCGACAA AATGATCGTC CGTCGTCGCA AGTAA
|
|---|
| Protein sequence | MAIVKCKPTS PGRRFVVKVV NQELHKGAPH APLLEKKSKS GGRNNNGRIT TRHIGGGHKQ
HYRLVDFRRN DKDGIAATVE RIEYDPNRTA HIALLLYADG ERRYIIAPKG VSAGDQLIAG
ALAPIKPGNA LQLRNIPVGS TVHGIELKPG KGAQIARSAG ASAQLIAREG VYVTLRLRSG
EMRKVLAECR ATLGEVSNSE HSLRSLGKAG AKRWRGVRPT VRGVAMNPVD HPHGGGEGRT
SGGRHPVSPW GFPTKGAKTR GNKRTDKMIV RRRK
|
|---|
| |